Gene Mflv_3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3715 
SymboluvrC 
ID4975031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3961490 
End bp3963526 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content68% 
IMG OID640457939 
Productexcinuclease ABC subunit C 
Protein accessionYP_001134975 
Protein GI145224297 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.329514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGATC CAGCGACGTA CCGACCCGCT CCCGGGTCCA TCCCCGTCGA ACCGGGCGTG 
TACCGATTCC GCGACCCGCA CGGACGCGTC ATCTACGTCG GCAAGGCGAA GAGTCTGCGC
AGCCGGCTCA ACTCGTATTT CGCCGACATC TCCGGTCTCG CGCCGCGGAC CCGCCAGATG
GTGATGACGG CCTCCAGTGT GGAGTGGACC GTCGTCGGCA CCGAGGTCGA GGCGCTGCAG
CTCGAGTACA ACTGGATCAA GGAGTTCGAT CCGCGATTCA ACATCCGCTA CCGCGACGAC
AAGTCCTATC CGGTGCTGGC GGTCACCCTC AACGAGGAGT ATCCGCGGCT GAAGGTCTAC
CGCGGGCCGC GCCGCAAGGG AGTGCGCTAC TTCGGTCCGT ACTCGCACGC GTGGGCCATC
CGCGAGACCG TGGACCTGCT GACCCGGGTT TTCCCGGCCC GCACCTGCTC GAACGGAGTG
TTCAAGCGGC ACAGTCAGAT TGACCGGCCG TGTCTGCTCG GCTACATCGA CAAGTGTTCG
GCCCCGTGTG TGGGCCGGGT CAGTGCCGAA CAGCACCGGC AGATCGTGCA GGACTTCTGC
GATTTCCTGG CCGGTAAGAC CGACCGGCTG ATCCGCGAGA TGGAACAGCA GATGACCGCG
GCCGCCGAGG ACCTGGACTT CGAGCGGGCG GCGCGGTTGC GCGACAACAT CGGGGCGATG
CGCCGCGCGA TGGAGAAGCA GACCGTGGTG TTGGGCGACG GCACCGACGC CGACGTGGTG
GCCTTCGCCG ACGACGAACT CGAAGCCGCG GTGCAGGTGT TTCACGTCCG GGGCGGGCGG
GTTCGCGGCC AGCGCGGCTG GGTGATCGAA AAGTCCGGAG AGCCGGGCGA ATCCACGCTG
GAGTACCTGG TCGAGCAGTT CTTGACGCAG TTCTACGGCG ATCAGGCCGA ACTCGGGGGC
GCCAGCGACG CCGGCGGTGA CGAGGCTAGC AACCCGGTCC CCAAGCAGGT TCTGGTTCCC
GTGCTGCCCG AGACGACGGA CGAACTGGAG ACCTGGCTGT CACAGCTGCG CGGATCGCGC
GTCGCGCTGC GGGTGCCCCA ACGCGGGGAC AAACGCGCAC TGGCCGAGAC GGTCAAACGC
AACGCCGAAG GGGCGCTCAA TCAGCACAAG CTGAAGAGGG CCGGCGATTT CACCGCCAGA
AGTGCTGCGC TGCAGAGCAT TCAGGAGAAC CTCGGTCTGC AGGACGCGCC GCTGCGCATC
GAGTGCATCG ACATCAGTCA CGTCCAGGGC ACCGATGTGG TGGCCTCGCT GGTGGTCTTC
GAGGACGGGC TGCCCCGCAA GTCCGACTAC CGCCACTTCG CGATCCGGGA GGCCGCCGGC
GACGGCCGCT CCGACGACGT CGCATCGATC GCAGAGGTGA CACGGCGCCG GTTCCACCGC
CACCTGCGCG ACATGCAGGA ACCCGGGGAG ATGGTCGCCG AAGGCCGGTC GCGCAGATTC
GCCTATCCGC CGAACCTGTT CGTCGTCGAC GGCGGCGCCC CCCAGGTGAA CGCCGCGCAG
GCCGTCCTCG ACGATCTCGG AATCTCCGAC GTCGCGGTGA TCGGGCTGGC GAAGCGACTC
GAGGAGGTGT GGGTCCCCAA CCTGGACGGC ACGGCGCCGG ATCCCATCAT CTTCCCCCGC
AACAGCGACG GCCTCTACCT GCTGCAGCGG GTCCGCGACG AGGCGCACCG GTTCGCGATC
TCCTATCACC GCAGCAAGCG CTCGAAGCGG ATGACCGCCT CGGCGCTGGA TTCGGTGCGC
GGGCTCGGTG AGCACCGGCG CAAGGCGCTG GTGACCCACT TCGGTTCGCT GGCCCGGCTC
AAGCAGGCGA CGGTCGAGGA GATCACCGAG GTGCCCGGCA TCGGCGCTGC GACAGCGCGG
GCGGTGCTCG ACGCGCTCGG CATCGAAGCG CCTCCGGAAC CCGGGGCCGA GGCGCCGCCC
GATTCGGGAG CGGCTGCGGC CGTTATGGGC AATGATCAGA GCAGGGTACC GGGATGA
 
Protein sequence
MPDPATYRPA PGSIPVEPGV YRFRDPHGRV IYVGKAKSLR SRLNSYFADI SGLAPRTRQM 
VMTASSVEWT VVGTEVEALQ LEYNWIKEFD PRFNIRYRDD KSYPVLAVTL NEEYPRLKVY
RGPRRKGVRY FGPYSHAWAI RETVDLLTRV FPARTCSNGV FKRHSQIDRP CLLGYIDKCS
APCVGRVSAE QHRQIVQDFC DFLAGKTDRL IREMEQQMTA AAEDLDFERA ARLRDNIGAM
RRAMEKQTVV LGDGTDADVV AFADDELEAA VQVFHVRGGR VRGQRGWVIE KSGEPGESTL
EYLVEQFLTQ FYGDQAELGG ASDAGGDEAS NPVPKQVLVP VLPETTDELE TWLSQLRGSR
VALRVPQRGD KRALAETVKR NAEGALNQHK LKRAGDFTAR SAALQSIQEN LGLQDAPLRI
ECIDISHVQG TDVVASLVVF EDGLPRKSDY RHFAIREAAG DGRSDDVASI AEVTRRRFHR
HLRDMQEPGE MVAEGRSRRF AYPPNLFVVD GGAPQVNAAQ AVLDDLGISD VAVIGLAKRL
EEVWVPNLDG TAPDPIIFPR NSDGLYLLQR VRDEAHRFAI SYHRSKRSKR MTASALDSVR
GLGEHRRKAL VTHFGSLARL KQATVEEITE VPGIGAATAR AVLDALGIEA PPEPGAEAPP
DSGAAAAVMG NDQSRVPG