Gene Mflv_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3138 
Symbol 
ID4974459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3322228 
End bp3323499 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content67% 
IMG OID640457361 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001134403 
Protein GI145223725 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.227563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGAATC GCTTGCGAAG GACCGCCGAA TCGGCGATTG TTTACCCACA GCCGGGGGGC 
AGTATTGAGG AGGATGGGGC TCTGACCCGC GCACACACGG CCACTGGCCA CGGGATCGGA
CAGGGCGCCG CGTCCACTAA GGGCGGCCCG GTCATCGAGA TCGATCACGT CACGAAACGC
TTCGGGGACT ATCTCGCCGT CTCCGACGCC GACTTCTCCA TCGCCTCGGG CGAGTTCTTC
TCGATGCTCG GCCCCTCCGG ATGCGGCAAG ACCACCACTC TGCGCATGAT CGCCGGCTTC
GAGACCCCGT CGGAAGGGGC GATCCGGCTC GAAGGCGCCG ACGTCTCCAA GACTCCCCCG
AACAAGCGCA ACGTCAACAC GGTGTTCCAG CACTACGCCC TGTTCCCGCA CATGACGGTG
TGGGACAACG TGGCCTACGG ACCGCGCAGC AAGAAACTCG ACAAGGGCGA GATCCGCAAA
CGTGTCGACG AACTCCTGGA GATCGTGCGG CTCTCCGACT TCGCCGAGCG CAAGCCCGCC
CAACTCTCCG GCGGGCAGCA GCAGCGGGTG GCGCTGGCAC GCGCGTTGGT GAACTACCCG
AGCGCCCTGC TGCTCGATGA ACCGCTCGGC GCCCTCGACC TCAAACTGCG GCACGTGATG
CAGTTCGAAC TCAAGCGGAT CCAGCGCGAG ATCGGCATCA CGTTCATCTA CGTGACGCAC
GACCAGGAGG AAGCGCTGAC GATGAGTGAC CGCATCGCGG TCATGAACGC CGGCAACGTC
GAACAGATCG GTACCCCCAC CGAGATCTAC GACCGGCCCG CGACGGTTTT CGTCGCCAGC
TTCATCGGCC AGGCCAATCT GTGGGCCGGC CGCCAGACCG GCCGCACCAA CCGGGACTTC
GTCGAGATCG ACGTCCTGGG GTCGACGCTG AAGGCCAGGC CGGGCGAGAC CACGATCGAG
CCGGGCGGCC ACGCGACGCT GATGGTGCGC CCCGAGCGGG TCCGCGTGTC GATGGACGCC
CCCACCGGCG ACGTCGCCGG CGTCCGGGCC ACGGTGTCGG ATCTGACCTT CCAGGGTCCG
GTGGTGCGAC TCTCACTGGC CGCACCGGAC GACTCGACGG TGATCGCCCA CGTCGGCCCG
GAGCAGGACC TGCCTCTGCT GCGCCCCGGC GACGAGGTCT ACGTCAGCTG GGCGCCCGAT
GCCTCGCTGG TGCTGCCCGG CGCCGACATC CCCACCACCG AGGATCTCGA AGAGATGCTG
GACGATTCCT GA
 
Protein sequence
MRNRLRRTAE SAIVYPQPGG SIEEDGALTR AHTATGHGIG QGAASTKGGP VIEIDHVTKR 
FGDYLAVSDA DFSIASGEFF SMLGPSGCGK TTTLRMIAGF ETPSEGAIRL EGADVSKTPP
NKRNVNTVFQ HYALFPHMTV WDNVAYGPRS KKLDKGEIRK RVDELLEIVR LSDFAERKPA
QLSGGQQQRV ALARALVNYP SALLLDEPLG ALDLKLRHVM QFELKRIQRE IGITFIYVTH
DQEEALTMSD RIAVMNAGNV EQIGTPTEIY DRPATVFVAS FIGQANLWAG RQTGRTNRDF
VEIDVLGSTL KARPGETTIE PGGHATLMVR PERVRVSMDA PTGDVAGVRA TVSDLTFQGP
VVRLSLAAPD DSTVIAHVGP EQDLPLLRPG DEVYVSWAPD ASLVLPGADI PTTEDLEEML
DDS