| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2888 |
|---|
| Symbol | |
|---|
| ID | 4974209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 3056067 |
|---|
| End bp | 3056561 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640457109 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_001134153 |
|---|
| Protein GI | 145223475 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0779863 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGAGG AACTCCACGT CACGTTCGTC TGCTCGGGGA ACATCTGTCG CAGCCCGATG
GCCGAGAAGA TGTTCGCCCA CCAGATCGAC GGGCGGGGCC TGGCCGGCGT GGTGCGGGTC
ACCAGCGCGG GGACCGGCCA CTGGCACGAG GGTGAGCCCG CCGACCGGCG GGCCAGCCAC
ACGCTGCGCG AACACGGCTA CCCCACGACC CACCGCGCCG CACAGATCAC CGACGAGCAC
CTCGCCGCCG ACCTCGTCGT CGCGCTCGGC CGCAACCATC TGCGCATGCT GCAACACATG
GGGGTGCCCG CCGAACGGCT GCGGATGCTG CGCTCGTTCG ATCCGCGTTC CGGCGCCCAT
GTTCTCGACG TCGAGGACCC CTACTACGGC ACGCAGGACG ACTTCGAGGA GACGTTCGCG
GTCATCGACG CGTCACTGCC CGGCCTGCAC AGCTGGGTGG ACGAGCGGCT CGCCGGCCGG
GAACAGGCGG GGTGA
|
|---|
| Protein sequence | MSEELHVTFV CSGNICRSPM AEKMFAHQID GRGLAGVVRV TSAGTGHWHE GEPADRRASH
TLREHGYPTT HRAAQITDEH LAADLVVALG RNHLRMLQHM GVPAERLRML RSFDPRSGAH
VLDVEDPYYG TQDDFEETFA VIDASLPGLH SWVDERLAGR EQAG
|
|---|
| |