Gene Mflv_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2415 
Symbol 
ID4973736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2516575 
End bp2517396 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID640456628 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001133680 
Protein GI145223002 
COG category[I] Lipid transport and metabolism
[R] General function prediction only
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00507131 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC TGGCCGGAAA GGTCGCTGTC GTCACCGGTG GTGCGTCGGG GATCGGGCGC 
GGTATCGCGG CGCGGTTCGC CGCCGAGGGT GCCGCGGTCG TGATCGCCGA CGTCCGCGAC
GACCTCGGTG AAGCGCTGGT CCGTGAGCTG AACGAGTCCG GTGCCAAGAC GGTCTACCGG
CACACCGATG TCGGCGACCA GGCGCAGGTC GCGGACCTGG TGTCCTCGAC GGTCGAGACC
TTCGGGGCGC TGAACGTGAT GGTGAACAAC GCGGGCATCT CCAGCCCGCT GCGCAAGGGA
CTGTTCCACG AGGACCTGGA GGAATTCGAC CGCGTCATGC GGGTCAATCT GCTCGGGGTG
ATGGCCGGGA CCCGCGATGC CGCACGCCAC ATGGCCGATC ACGGTGGCGG GTCGGTCATC
AATCTGGGGT CGATCGGCGG CATCCAGGCC GGTGGGGGCG TGTCGACCTA CCGGGCGTCC
AAGGCGGCGA TCATCCACTT CACCAAGTGC GCGGCCATCG AGCTCGCGCA CTACGAGGTG
CGGGTGAACT GTCTTGCCCC CGGGAACATT CCGACGCCGA TCCTCGCATC ATCGGCCACC
GATGAGGACC GCGAACGGTT GGAGAAGTTC GAGGCGAGGA TCCGTCAACA GATGCGTGAC
GACCGTCCCT TGAAGCGTGA AGGCACCGCC GACGACGTCG CGGAGGCGGC GCTCTACCTT
GCGACCGACC GGTCGCGGTA CGTGACCGGC ACCGTGCTGC CGATCGACGG CGGCACGGTC
GCGGGGAAGG TGATCGTCCG CAAACCGAAA GACCAGCAGT AG
 
Protein sequence
MTELAGKVAV VTGGASGIGR GIAARFAAEG AAVVIADVRD DLGEALVREL NESGAKTVYR 
HTDVGDQAQV ADLVSSTVET FGALNVMVNN AGISSPLRKG LFHEDLEEFD RVMRVNLLGV
MAGTRDAARH MADHGGGSVI NLGSIGGIQA GGGVSTYRAS KAAIIHFTKC AAIELAHYEV
RVNCLAPGNI PTPILASSAT DEDRERLEKF EARIRQQMRD DRPLKREGTA DDVAEAALYL
ATDRSRYVTG TVLPIDGGTV AGKVIVRKPK DQQ