Gene Mflv_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2408 
Symbol 
ID4973729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2507854 
End bp2510577 
Gene Length2724 bp 
Protein Length907 aa 
Translation table11 
GC content64% 
IMG OID640456621 
Producttype III restriction enzyme, res subunit 
Protein accessionYP_001133673 
Protein GI145222995 
COG category[V] Defense mechanisms 
COG ID[COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATT CGGATGACGA CGCCCGGCTG CCGGCCGAAG CGCGCGCCCG CAAGCTCATC 
GATTCACAGC TGACCCAGGC GGGTTGGGTC GTTCAGGACA AGAAGGACCT GAATCTCTTC
GCGGCGCAAG GCGTCGCCGT CCGCGAAGTG GTGATGAAGC CCGGACACGG CCGCGTCGAT
TATCTGCTGT ACGTCGACAA GGCAGTCGTC GGCGTCATCG AGGCCAAACC CGTCGGCACG
CCGCTATCCG GTGTGGAATG GCAGTCGGCG ATGTACGCCG ACGGTCTGCC CGCCGACGTC
AGGATCGCCG CCAAGACACG GGATGGCCGG TTGCCGTTCG TGTTTGAGGC TTCCGGCGTC
GAGACCCACT TCACCAACGG GTTCGACCCG GAACCCCGCG CCCGGCTGAT CTTCAACGTC
CCGCGGCCCG AAACGATGGC CCGCCACCTT CGCGAGGCCG AGACGAATCC GGACTCTCCT
ACCTGGCGTG CCAAGGTACG CAAGCTTCCG GCACTGGACA CCGAGGCGCT GCGGCCGGCG
CAGATCGAGG CCATCAACGG AGTTGAGCAG AGCCTGGCCG ATCAGCGATA CGACCGGTCG
TTGGTCCAGA TGGCGACCGG GGCGGGCAAG ACATTCACGG CGGTGACACA GTCCTATCGG
CTCCTCAAGC ACGGTGGCGT CGACCGGGTC CTGTTCCTGG TGGACCGCAA CAATCTCGCC
GACCAGACCC TGGGTGAGTT CCAGAACTAC CGCACACCCG ATGACGGTCG ACGCTTCACC
GAGCTCTACA ACGTCAACAA GCTCTCCAGC GCGGGGCTAC TGGGGTCGAC CAAGGTGACG
ATCTCGACGA TCCAGCGGGT GTTCCGTTTC ATCAAGGCGG GCGAAGTCAG CGACACCGAC
GACCCCGATA TCGACGATTA CATCCCGGAC GCGCCGGTCA CCGTCTCCTA CAGTGATGCG
CTGCCGCCGG AGACCTTCGA TCTGGTGATT GTCGACGAGG CGCACCGCAG CATCTACGGG
GTGTGGCGCG GAGTATTGGA GTACTTCGAT GCGCACGTGG TCGGCCTGAC CGCGACACCG
GGCAAGCAGA CCTTCGCGTT CTTCCGGCAG AACCTGGTCT CGGACTACAC GTACCCGGAA
TCGGTCGCCG ACGGTGTCAA CGTCGACTTC GACGTCTACC GGATCCGCAC CAAGATCAGT
GACCAGGGAT CGCATATCGA GGCCGGCACC ATCGTCCCCA AGGTCGATCG CCGAACCCGC
GAACAACGGC TCGAAACACT CGACGACGAT CTGGATTACG TTCCGGGACA GCTCGACCGG
GCGGTCACCG CCACCGACCA GATTCGCACG GTGCTGGAAT CCTTCCGCGA CCGGCTGTTC
ACCGAGATCT TCCCCGGCCG CAGCACGGTT CCGAAGACAC TGATCTTCGC CAAGGACGAT
AACCACGCCG AGGAGATCGT CAAGCAGGTG CGGGAGGTCT TCGGCAAGGG CAACGACTTC
GCCGCGAAGA TCACCTACAA CGCGCGCAAC GCCAAGGAGC AGTTGAAGGC CTTTCGCACC
AGCCCGAGCC TGCGCATCGC CGTGACGGTC GACATGATCG CGACCGGCAC CGACGTCAAA
CCGCTGGAAT GCGTGTTCTT CATGCGCGAC GTGCGTTCGG CGCAGTACTT CGAACAGATG
AAGGGCCGGG GCGCACGCAC CGTCCCCGAC GCCGACTTCC AGGCGGTCAC CCCGGACGCC
ACGTCCAAGA CTCGGTTCGT CATCGTCGAC GCGATCGGTG TCACTGAACA CGAGTTCGTC
GAACCGCCGC TGAACCGGCA GCGGTCGGTG CCGTTGAAGA AGCTGCTGGA GAAGGCGGCG
AATCTGACGA TCACCGAGGA TGAAGCGGCC ACCCTGGCCT CGCGGCTGGC CAAACTCGAA
CTCGACCTGA CCGACGCTGA GCGGGTGGAG CTCGACGAGG TGGCGGGACA ACCGGTGCGC
GACGTCATCC GGTCGTTGGT GGATGCGGTC GAGCCGTCGA CCACGACACC CGAGGCGATC
GAGGCTGCCC TGGTACCGAT CGCGTCGAAC CCGGAGCTGC GCAGCCGTGT CCTGGAACTT
CGGGCCGCGC ACGACCGGAT CATCGACGAG GTCAGCGCCG ACGAGCTGAT CGAAGCCGGG
GGAGTTGTGG ACACCGGTAA GGCCCGGCAC ATCGTCGAGT CCTGGACCGC ATATCTCGAC
GAGCACCGTG ATGAGATCAC GGCGCTGCAA TTGGGTTATG AGGCCGGTGA GCGACGCATT
GACTTCGCCT TCATCGAGGG TCTGGCAACG AGAATCGCTC GGCCACCACA CAATTGGACG
CCGGATGTCA TCTGGAACGC GTACGCCGCC ATCGACGGGG AGAAGGTGCA CAGGAGTGCC
ACGCACGCGG TCACCGACCT GGTGTCACTC GTGCGGTATG CCACCGGCGT CGACGACGAG
CTCGTGCCCT ACGGTGACCG GGTGCGGGAG AAGTACGCGG CGTGGTTGAC GCAGCAGGAG
CAGGCCGGGG TGACGTTCAC CGACACCGAA CGGTGGTGGC TGGACCGGAT GGTGTCGGTC
ATCGCGAGCT CTGCTGGTAT CCGAGTGGAG GACCTCGATG ATGCGCCGTT CATTGAACGC
GGTGGAACCG ACGGGGCGAT AAGGGATTTG GGTGACCGGG CAGCGGAGTT GATTGACGAG
TTGAATGCGG AGCTAACGGC GTGA
 
Protein sequence
MSDSDDDARL PAEARARKLI DSQLTQAGWV VQDKKDLNLF AAQGVAVREV VMKPGHGRVD 
YLLYVDKAVV GVIEAKPVGT PLSGVEWQSA MYADGLPADV RIAAKTRDGR LPFVFEASGV
ETHFTNGFDP EPRARLIFNV PRPETMARHL REAETNPDSP TWRAKVRKLP ALDTEALRPA
QIEAINGVEQ SLADQRYDRS LVQMATGAGK TFTAVTQSYR LLKHGGVDRV LFLVDRNNLA
DQTLGEFQNY RTPDDGRRFT ELYNVNKLSS AGLLGSTKVT ISTIQRVFRF IKAGEVSDTD
DPDIDDYIPD APVTVSYSDA LPPETFDLVI VDEAHRSIYG VWRGVLEYFD AHVVGLTATP
GKQTFAFFRQ NLVSDYTYPE SVADGVNVDF DVYRIRTKIS DQGSHIEAGT IVPKVDRRTR
EQRLETLDDD LDYVPGQLDR AVTATDQIRT VLESFRDRLF TEIFPGRSTV PKTLIFAKDD
NHAEEIVKQV REVFGKGNDF AAKITYNARN AKEQLKAFRT SPSLRIAVTV DMIATGTDVK
PLECVFFMRD VRSAQYFEQM KGRGARTVPD ADFQAVTPDA TSKTRFVIVD AIGVTEHEFV
EPPLNRQRSV PLKKLLEKAA NLTITEDEAA TLASRLAKLE LDLTDAERVE LDEVAGQPVR
DVIRSLVDAV EPSTTTPEAI EAALVPIASN PELRSRVLEL RAAHDRIIDE VSADELIEAG
GVVDTGKARH IVESWTAYLD EHRDEITALQ LGYEAGERRI DFAFIEGLAT RIARPPHNWT
PDVIWNAYAA IDGEKVHRSA THAVTDLVSL VRYATGVDDE LVPYGDRVRE KYAAWLTQQE
QAGVTFTDTE RWWLDRMVSV IASSAGIRVE DLDDAPFIER GGTDGAIRDL GDRAAELIDE
LNAELTA