| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2304 |
|---|
| Symbol | |
|---|
| ID | 4973626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 2396986 |
|---|
| End bp | 2397663 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640456514 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001133570 |
|---|
| Protein GI | 145222892 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.808365 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGA GCGTGGGCGC CTTCGCGAAT TCAGCACCAG CCGATCAAGT GACGAGTCCG
GTCGCGGATC CGCCCGTCGA ACCCAAGGCC AGGACCGTCC GGGATCGGCT CATCGACGCC
GCCGAACAGT GCCTGACGGC CAAGGGAATC CGCGCGACCA CGGTGTCGGA GGTCGCCGAG
GTCGCGGGTG TGAGCCGGGG CTGGCTCTAC CGCCACTTCC CCGACAAGTC GGAGCTGCTC
GGCGCGGCGA TCGTGCGACT CAACGACGCG TTCTGGACCG AATCGCGCAC CCGCCTCGAC
TCGGTGACCG GCCTCGATGA GCAGATCGCA GCCGGCGTCG CCCTTGCGCG CAAGGAATCC
GAGACGCCCG GGGCGCTCGT GCTCAAGCTC CGCCAGGAGG AGCCGGAGGC GTTCACCGCA
TGTGTGGGAC TCGGTGTGCG CGGGCTGATT CCCGAGATCG CGGCGTTCTG GGAGCCCTAT
ATCCAGGCCG CGGTCGACCG GGGCGAGATC CACGCCGACA CCGATCGCGC GGAGGCCGCG
GAGTGGATCG CGCGCATCAC CATGAGCCTG GCGACGGTGC CCGGAGAGCA GTGCGACGTC
GACGACCACG AGTCGGTGCT GCGGCATGCG CGTCGCTACA TCGTGGCCGC GTTCCGCAGC
GATCCGGCGG GTACCTGA
|
|---|
| Protein sequence | MSMSVGAFAN SAPADQVTSP VADPPVEPKA RTVRDRLIDA AEQCLTAKGI RATTVSEVAE
VAGVSRGWLY RHFPDKSELL GAAIVRLNDA FWTESRTRLD SVTGLDEQIA AGVALARKES
ETPGALVLKL RQEEPEAFTA CVGLGVRGLI PEIAAFWEPY IQAAVDRGEI HADTDRAEAA
EWIARITMSL ATVPGEQCDV DDHESVLRHA RRYIVAAFRS DPAGT
|
|---|
| |