Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_2147 |
Symbol | |
ID | 4973469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 2221769 |
End bp | 2222353 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640456356 |
Product | HhH-GPD family protein |
Protein accession | YP_001133413 |
Protein GI | 145222735 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR03252] uncharacterized HhH-GPD family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00539859 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0545007 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGAAAC TGCAGTTGGT TCAGGACCCC GCGGCCGACG AGTTGCTGGA GGCCAATCCG TTCGCGCTTC TGGTCGGGAT GCTGCTCGAT CAGCAGATAC CGATGGAAGT GGCGTTCGCG GGGCCGAAGA AGATCGCCGA CCGCATGGGC AGCTTCGACG CCGAGACGAT CGCCGACCAC GACCCCGAGG CGTTCACCGC GCTGTGCGCG CAATCGCCTG CGGTGCACCG GTTTCCGGGC TCGATGTCGA AGCGGGTGCA GGCGCTGGCG CAGGTGATCG TCGACGAGTA CGGCGGAGAC GCATCGGCGC TGTGGTCCGA TGGCGCCGAC GGCAAAGAGG TGTTGCGCCG GCTCAAGGCG CTCCCGGGTT TCGGGGAACA GAAGGCCAAG ATCTTCCTCG CCCTGCTCGG CAAGCAGTAC GGCGTCGACG CCAAGGGATG GCGGGCCGCG GCCGGTGACT ACGGCAAGGC GGGCAGTCAC ATGTCGGTGG CGGATGTGAA GGATCCGGGG TCGCTGCAGA AGGTGCGGGC GTACAAGAAG GAAGCGAAGG CCGCAGCGAA GGCCGCGAAG GCCGCCAAGG TCTGA
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Protein sequence | MAKLQLVQDP AADELLEANP FALLVGMLLD QQIPMEVAFA GPKKIADRMG SFDAETIADH DPEAFTALCA QSPAVHRFPG SMSKRVQALA QVIVDEYGGD ASALWSDGAD GKEVLRRLKA LPGFGEQKAK IFLALLGKQY GVDAKGWRAA AGDYGKAGSH MSVADVKDPG SLQKVRAYKK EAKAAAKAAK AAKV
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