Gene Mflv_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2102 
Symbol 
ID4973424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2178581 
End bp2179612 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content66% 
IMG OID640456311 
Productvirulence factor Mce family protein 
Protein accessionYP_001133368 
Protein GI145222690 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0525635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.778813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCA GCATCCGACG TGACGCGACG CGTCTCGGTG CGTTCCTGGC TGTCTGCCTG 
CTCGGTGTGT TCGGCCTGTT CGCGGTGTTC GGTCAGATGC GATTCGGGGA GAAGACCCAG
CAGTACCGTG CCGAGTTCGT GAATGTGACG GGGCTGGAGA CCAACGACTT CGTCCGCATC
GCCGGTGTCG AGGTCGGCAA GGTCGAGAAC GTCGAGATCC AGCCCGACAC CACCGCGGTG
GTCGAGTTCA CCGCCGACGA CTCGGTGGTG CTGACCCAGG GCAGTCGCGC GGTCATCCGG
TACGACGACC TGATCGGCGG CCGCTACCTG GCACTCGAGG AAGGCGCCGG GGGGACCCAG
AAGCTGAACC CGGGCGGGAC GATCCCGCTG GCGCGTACCT CACCCGCGCT CGACCTGGAC
GCGCTGATCG GCGGTTTCCG GCCGCTGTTC CGTGCCCTCG ATCCCGACCA GATCAATGCG
CTCTCAGGAC AACTCATCTC GGCGCTGCAA GGCCAGGGCG GCACCATCAA CTCGTTCCTG
GCGCAGACCG CGGCGCTGAC GAGCACGCTG GCCGACCGTG ACCAGTTGAT CGGCGAGGTG
ATCATCAACC TCAACACCGT GCTCGGCTCC CTCGGTGACC AGAGCGACCA GTTCGCCAAG
GCGGTCGACT CGCTGTCCCA GCTCGTCGAA GGACTGTCGG ATCGCCGCCA GGAGATCAGC
GACGGCCTGG CCTACACGAA CGCCGCGGCG GGCAGCATCG CCGACTTCCT CACCGAGGCC
CGCCCGCCGC TGAAGAAGAC GATCGACGAG ACCGACCGTG CCGCAGGCAT CGTCGTCGCC
GACCACGAGT ACTTCGACAA CCTGATCAAC ACGCTGCCCG ACGCGTACCA GGTGCTGGCG
CGACAGGGCA TCTACGGCGA TTTCTTCAGC TTCTACCTGT GCGACATCGT CCTCAAGCTC
AACGGCAAGG GGGGCCAGCC CGTCTACGTG AAGGTCGCCG GCCAGTCCAG CGGGAGGTGC
GCGCCGCGAT GA
 
Protein sequence
MSVSIRRDAT RLGAFLAVCL LGVFGLFAVF GQMRFGEKTQ QYRAEFVNVT GLETNDFVRI 
AGVEVGKVEN VEIQPDTTAV VEFTADDSVV LTQGSRAVIR YDDLIGGRYL ALEEGAGGTQ
KLNPGGTIPL ARTSPALDLD ALIGGFRPLF RALDPDQINA LSGQLISALQ GQGGTINSFL
AQTAALTSTL ADRDQLIGEV IINLNTVLGS LGDQSDQFAK AVDSLSQLVE GLSDRRQEIS
DGLAYTNAAA GSIADFLTEA RPPLKKTIDE TDRAAGIVVA DHEYFDNLIN TLPDAYQVLA
RQGIYGDFFS FYLCDIVLKL NGKGGQPVYV KVAGQSSGRC APR