Gene Mflv_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1853 
Symbol 
ID4973177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1924613 
End bp1925362 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID640456061 
Productshort chain dehydrogenase 
Protein accessionYP_001133121 
Protein GI145222443 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.787999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGGC AGAAGATCTT GATCACCGGC GCGAGCTCCG GGCTCGGCGC CGGGATGGCC 
CGGCAGTTCG CCGCCAAGGG ACGCGACCTC GCGCTGTGCG CGCGCCGGCT CGACAACCTC
GACGAACTGC GGACCCAGCT GCTGGCCGAC TTCCCGAACA TCAAGGTCGC CGTCGCGGCG
CTCGATGTCA ACGACCACGA GCAGGTGCCG AAGGTCTTCA CCGAGCTCAG CGACGAACTC
GGCGGCATCG ACTGCGTGAT CGTCAACGCC GGCATCGGCA AGGGGTATCC GCTGGGCGGC
GGCAAGATGT GGGCCAACAA GGCCACCCTC GAGACCAACC TGGTCGCGGC GCTCGTGCAG
ATCGAGACCG CGCTGGAGAT GTTCAAGGCA GCGGGCGCCG GACACCTGGT GCTCGTGTCG
TCGGTGCTGG GCAACGTCGG TGTGCCCGGC TTCAAGGCGG CCTACTCGGC GAGCAAGGCC
GGCGTGACCT CCCTCGGTGA ATCGCTGCGG GCCGAGTACC CGTCCGGCCC GATCAAGATC
ACCGTGCTGG AGCCCGGCTA CATCGAGTCC GAGATGACCG CGAAGTCGAA CTCGACGATG
CTGATGGTCG ACAACGAGAC CGGCGTCAAG GCGATGGTCG ACGCGATCGA GAAGGAGAAG
GGCCGCGCCG TGGTCCCCGG TTGGCCCTGG TGGCCGCTCG TGGAGGTCAT GAAGCTGCTG
CCGCCGAGGT TCACCAAGTA CTTCGCCTGA
 
Protein sequence
MTRQKILITG ASSGLGAGMA RQFAAKGRDL ALCARRLDNL DELRTQLLAD FPNIKVAVAA 
LDVNDHEQVP KVFTELSDEL GGIDCVIVNA GIGKGYPLGG GKMWANKATL ETNLVAALVQ
IETALEMFKA AGAGHLVLVS SVLGNVGVPG FKAAYSASKA GVTSLGESLR AEYPSGPIKI
TVLEPGYIES EMTAKSNSTM LMVDNETGVK AMVDAIEKEK GRAVVPGWPW WPLVEVMKLL
PPRFTKYFA