Gene Mflv_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1730 
Symbol 
ID4973054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1799833 
End bp1801269 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content68% 
IMG OID640455937 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001132998 
Protein GI145222320 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.599699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCA GGCGTAAGGC CATCATCCTG GTGTCCTGCT GCCTGAGCCT GCTGATCGTG 
TCGATGGACG CCACCATCGT CAACGTCGCG ATCCCGTCGA TCCGCGCCGA CCTGTCGGCC
AGCCCCGCGC AGATGCAGTG GGTCGTCGAC ATCTACACGC TGGTGCTGGC GTCGCTGCTG
ATGCTCTCCG GTGCGACGGG GGACCGGTTC GGACGACGGC GTCTGTTCCA GATCGGGCTA
ACGGTGTTCG CCCTCGGGTC GCTGGCGTGC AGCCTGGCGC CGACGATCGA TACGTTGATC
GGCGCGCGGT TCCTGCAGGG TGTCGGCGGT TCGATGCTCA ATCCCGTTGC GCTGTCGATC
ATCTCGCAGA TCTTCACCAA GCCGGTGGAG CGGGCGCGGG CGCTGGGCAT CTGGGGTGGG
GTCACCGGCA TCTCGATGGC GGCCGGCCCC ATCGTGGGCG GTCTGCTGAT CGAGACCGTC
GGGTGGCGGT CGGTGTTCTG GATCAACCTG CCCATCTGTG CCGCCGCGAT CATCCTGACG
GCGGTGTTCG TGCCGGAGTC CAAGTCGCAG ACCATGCGCA ACGTCGACCC GATCGGTCAG
GGTCTGGGGA TCCTGTTCCT GTTCGGCACC GTCTTCACCC TCATCGAGGG TCCCGTGCTG
GGGTGGACCA ACCCGCGCGT GCTGGCGATC GCAGCCGTCG CGGTGGTGGC GCTGATCGCG
TTCCTGCGCT TCGAATCCCG GCGTCACGAC CCGTTTCTGG ATCTGCGGTT CTTCCGCAGC
ATCCCGTTCA CGACCGCGAC GATCAACGCG ATCAGTGCGT TCGCCGCATG GGGCGCTTTC
CTGTTCATGA TGTCGCTGTA CCTGCAGGGC GAGCGCGGAT TCTCGGCGAT GCAGACCGGC
TTGATCTATC TGCCGATCGC GCTCGGGGCA TTGTTCTGCT CCCCGCTGTC GGGCCGCCTG
GTGGGGCGGT ACGGCGCCCG CCCGTCGCTG GTGGCCGCGG GCATCCTGAT CACCACGGCG
GCAACGTTGT TGACGTTGCT GACCGCGACG ACGCCGGTGT GGCATCTGCT GATCGTGTTC
GCGGTGTTCG GCGTCGGGTT CTCGATGGTC AATGCCCCGA TCACCAACGC CGCGGTCAGC
GGGATGCCGC TGGACCGTGC CGGGGCGGCG TCGGCGGTGA CGTCGACCAG CCGCCAGGTC
GGGGTGAGTA TCGGTGTGGC GCTATGTGGT TCGGTCGCCG GGGCGGCGAT GGCCGGAAGC
GGCACCGACT TCGCGACCGC GGCCCGACCG CTGTGGTTCG TGTGTATCGC ACTCGGCCTG
GTGATCCTCG CTGTGGGTTT CTTCTCGACC TCGCAGCGGG CGGTGCGCTC CGCGGAGAGA
CTCGCTCCCC TGGTGGCGGG GGCGCCCGAC CCGGTCAATG GTGCCCATGT CCGGTGA
 
Protein sequence
MTPRRKAIIL VSCCLSLLIV SMDATIVNVA IPSIRADLSA SPAQMQWVVD IYTLVLASLL 
MLSGATGDRF GRRRLFQIGL TVFALGSLAC SLAPTIDTLI GARFLQGVGG SMLNPVALSI
ISQIFTKPVE RARALGIWGG VTGISMAAGP IVGGLLIETV GWRSVFWINL PICAAAIILT
AVFVPESKSQ TMRNVDPIGQ GLGILFLFGT VFTLIEGPVL GWTNPRVLAI AAVAVVALIA
FLRFESRRHD PFLDLRFFRS IPFTTATINA ISAFAAWGAF LFMMSLYLQG ERGFSAMQTG
LIYLPIALGA LFCSPLSGRL VGRYGARPSL VAAGILITTA ATLLTLLTAT TPVWHLLIVF
AVFGVGFSMV NAPITNAAVS GMPLDRAGAA SAVTSTSRQV GVSIGVALCG SVAGAAMAGS
GTDFATAARP LWFVCIALGL VILAVGFFST SQRAVRSAER LAPLVAGAPD PVNGAHVR