Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_1273 |
Symbol | ligC |
ID | 4972599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 1326095 |
End bp | 1327150 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640455473 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_001132543 |
Protein GI | 145221865 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.22692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCCG TGGACCTCCC CGTTCGACCG CCACTGGAGC CGATGCTGGC CAAGGCGCAG GCAAAGGTGC CCGACGATCC TGGCGTGTGG TCCTACGAAC CGAAGTGGGA CGGCTTCCGC GCGCTGGTGT TCCGCGACGG AGATGACGTC GTCCTGCTGT CGCGCAGCGG CAAGGACCTC GGGCGGTACT TCCCCGAGGT CCTGGATGCG GTCCGCGACG AACTCGCGCC GCACTGCGTC CTCGACGGCG AGATCGTCGT CCCCCGCGAG ATAGGGGGAC GGATGCGACT GGACTGGGAG TCGCTGAGCC AGCGGATCCA TCCCGCCGAG TCCCGCATCA CGCTGCTGTC GGAGCAGACA CCCGCGCACT TCATCGGCTT CGATGCCCTG GCGCTCGGAG ACACCCCGCT GATGAAAGAG CCGTTCCGGA CCCGCCGCGA AGCGCTCATC GACGCCGTGA CGCCGAAACA GTGGTGCCAC GTCACCCGCA CCACCGAGGA TCCCCAGCTC GGCACACAGT GGCTCGACGA GTTCGAGGGC GCCGGCCTCG ACGGGGTGAT CGCCAAACGT CTCGACGGGC CTTACCTACC CGGTAAACGG GAGATGGTCA AGGTCAAGCA CCACCGTGAC GCAGACTGCG TGGCGATGGG CTACCGGATC CACAAGAGCG GCGAGGGCAT CGGCTCGATC CTGCTCGGCC TGTACCGCGA CGACGGGGAG CTGCAGATGG TCGGCGGCGC GGCCTCGTTC ACCGCCAAGG CGCGGCTGAA GCTGCTCGAC GACCTGGAAC CGCTGCGCAT CGGCGACGAT CTACGCGACG GTGAACCCAG CCGGTGGAAC TCCGCGGCCG ACAAGCGTTG GATCCCGGTG CGCCCCGAAC GGGTGTGCGA GGTGGCCTAC GACCAGATGG AAGGCAACAC CGAGCACGGA CGACGGTTCC GCCACGCCGT GAAGTTCCTG CGCTGGCGCC CCGACCGGGA CCCGCAGAGC TGCACGTTCG ACCAGCTCGA CGTCCCCCTG CACTTCGACC TCTACGACGT GCTGGAAAGG TCCTGA
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Protein sequence | MEAVDLPVRP PLEPMLAKAQ AKVPDDPGVW SYEPKWDGFR ALVFRDGDDV VLLSRSGKDL GRYFPEVLDA VRDELAPHCV LDGEIVVPRE IGGRMRLDWE SLSQRIHPAE SRITLLSEQT PAHFIGFDAL ALGDTPLMKE PFRTRREALI DAVTPKQWCH VTRTTEDPQL GTQWLDEFEG AGLDGVIAKR LDGPYLPGKR EMVKVKHHRD ADCVAMGYRI HKSGEGIGSI LLGLYRDDGE LQMVGGAASF TAKARLKLLD DLEPLRIGDD LRDGEPSRWN SAADKRWIPV RPERVCEVAY DQMEGNTEHG RRFRHAVKFL RWRPDRDPQS CTFDQLDVPL HFDLYDVLER S
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