| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1272 |
|---|
| Symbol | |
|---|
| ID | 4972598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 1324446 |
|---|
| End bp | 1326044 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640455472 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_001132542 |
|---|
| Protein GI | 145221864 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.250117 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATT CAGGGTTGGC GGGGCTGGAC AAGCCGGCGT TGATCTCGGC GATCGAACAG
GCCGCCTGTG AGGAGGTCCG GGCCGGGGCA CGCAAGACGG CGGCGATCGC GGCGCTGGTC
CATGACCACG TGACCTATGA CGATGTGCGC GACGAGTGGG TGTGGGACTC CTGGATCGAG
ACGGCCTGCG AACTCGGTGC GGTGTTGAAC ACCAGCCACC GCCGCGCCTC GGCCCAGATG
CGCATCGCCG TCGCGCTGCG CGATCGGCTG CCCGGGGTTG CCGCCCTTCA TGCGCAGGGC
CGGCTCAGCG CCCGGCTGAT CGGGCAGATC ACCTGGCGCA CCCGACTGGT GCAGGACCCG
CAGGCGCTGG CACTGATCGA TGCTGCGATC GCGGAGAAGG CGACGCGGTG GGAACCACTG
TCGGAGGACA ACCTGACCGC CGCCCTCGAC GCGGTGATCG AGCGCTTCGA CCCGGACGCC
GTGATCAGGA CCCGTGAGCA GCTCAAGGGG GTGGATTTCC GGATCGGGGC CAGTGACGAC
CCTGACGCGC TGGTCACGGT CTGGGGCAAG ATCCTGGGCT GCGACGCTGT GGTGTTGGCG
GCCCGGATCG CCGAACTGCT CAAAGGGCTT TGCGATGCCG ACCCCCGCGG AATCGGTGAG
AGGCGCTCGT GCGCGGTCGG GGCCATCGTC CGCGGCCAGG ACCATCTTCC GTGCCGGTGT
GGATCCCCGG ACTGCGCCGC CGCCCCGGTG GTGCCGGGGT CGTCGAACGT GGTGATCTCG
GTGCTGGCCG ATCCCGCCGC GCTCGAGGCC GTCCGCTCCC TGATCGCCGA CGAAGACCGC
CACCAACAAG ACGCACTCGC CGAGAAACAG CCGCACGCCG TTAAGGCGAA GGAGCAGGGC
GAGCCTGCCG CACCCGCGCC ATCGAATCGT GGCCGGTGTG TGCGGGATTC GGGGACCGCG
CTGCTGCCCG GGGTGAAGAT CTTGCCGATT GTGGCGCTCG CCGAGGCGAT CCGGGCTGGG
GCGGCGATCA AGCAACTGTG GCTGCCCGGC CCTGACCCCG AACCGCACTA CCGCCCCTCG
GCCAAGCTGG CGGCGTTCGT ACGAGCCCGA GATCTGTTCT GCCGCTACCC CGGCTGCAAC
GTGCCCGCCG AACAGTGCGA TATCGACCAC GTCGTGCCGT GGCCCTACGG GCCCACCCAC
CCGTCGAATC TCAACTGCAA GTGCCGAACC CATCACTTGG GCAAGACATT TGCCGAAGGC
TGGCACGAGG AACAGTTGCC CGATGGGACG GTGATCTGGA CGACCCCGGC CGGGCAGCGC
TACTCCACGG TGCCGGGCAG TCGGTTGTTC TTCCCCGGCT GGGACACCAC CACCGCCGAA
CTTCCGCCGA TGGCCCAACC GCCACCGGAC CCCGACCGCC TGGCGAAGAT GCCGAAACGA
CGACGCACCC GCGCCGCCGA CCACGCCGCC CGCATCAAAG CCGAACGCGA GGACAACGCC
CACCAACGCG CCCTCGAAAC CGAACGCGCG GCGGCCAGAC GATCCGGCCT ACCGCCCCCG
GCGCCACCGG ACTACGGCGA CGACCCGCCA CCCTTCTGA
|
|---|
| Protein sequence | MFDSGLAGLD KPALISAIEQ AACEEVRAGA RKTAAIAALV HDHVTYDDVR DEWVWDSWIE
TACELGAVLN TSHRRASAQM RIAVALRDRL PGVAALHAQG RLSARLIGQI TWRTRLVQDP
QALALIDAAI AEKATRWEPL SEDNLTAALD AVIERFDPDA VIRTREQLKG VDFRIGASDD
PDALVTVWGK ILGCDAVVLA ARIAELLKGL CDADPRGIGE RRSCAVGAIV RGQDHLPCRC
GSPDCAAAPV VPGSSNVVIS VLADPAALEA VRSLIADEDR HQQDALAEKQ PHAVKAKEQG
EPAAPAPSNR GRCVRDSGTA LLPGVKILPI VALAEAIRAG AAIKQLWLPG PDPEPHYRPS
AKLAAFVRAR DLFCRYPGCN VPAEQCDIDH VVPWPYGPTH PSNLNCKCRT HHLGKTFAEG
WHEEQLPDGT VIWTTPAGQR YSTVPGSRLF FPGWDTTTAE LPPMAQPPPD PDRLAKMPKR
RRTRAADHAA RIKAEREDNA HQRALETERA AARRSGLPPP APPDYGDDPP PF
|
|---|
| |