| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1254 |
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| Symbol | ligC |
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| ID | 4972580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 1306721 |
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| End bp | 1307821 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640455454 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001132524 |
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| Protein GI | 145221846 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.351593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000397091 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGGGGA TGCGCCTACC CGTGATGCCC CCGCTCTCAC CGATGCTCTC GAAGTCGGTG
CAGCAGATCC CGGACGGCGC CTCGTATGAA CCGAAGTGGG ACGGCTTCCG GTCGATCGTG
TTCCGTGACG GCGACGAGAT CGAATTCGGC AGCCGCAACG AACGCCCGAT GACCCGTTAC
TTCCCGGAGC TCGTCGCGGC GGCCCGCTCC GAGCTTCCCC CGCGCTGCGT CGTCGACGGC
GAGATCGTGA TCGCAACCGC CGGCGGACTC GACTTCGAAG CGCTGCAGTT GCGTCTGCAC
CCGGCCGCAT CGCGGGTCAC CATGCTGGCG GAGAAGACCC CGGCGTCCTT CATTGCATTC
GACCTGCTGG CACTCGGCGA CACCGACCTG ACCGGCCGCC CGTTCACCGA ACGGCGCGCG
GCACTGGTCG ACGCGCTCGC CGGTGCCGGA CCGACGTTCC ACGTCACCCC GGCCACCCGG
GACATCGCGC TGGCCACTCG ATGGTTCGAC GAGTTCGAGG GCGCGGGCCT GGACGGGGTG
ATCGCCAAGC CTGTCGACGG CGTCTACCTG CCGGACAAGC GGACGATGTT CAAGATCAAG
CACCGGCGCA CCGCCGACTG TGTGGTCGCG GGGTACCGGT TGCACAAGTC CGGTGACGAC
GCTGTCGGCT CGCTGCTGCT CGGGCTCTAC GACTCCGACG GCGCGCTCGC GTCGGTCGGC
GTGATCGGTG CGTTCCCGAT GGCGCGGCGA CGTGCGCTTC TCGCCGAATT GCAGCCGCTG
GTGACGACCT TCGACGAGCA TCCGTGGAAC TGGGCCGCGC ACGCCGACCC GGACGTCGTC
CGCCGGCACG GCGGCGGGTC ACGGTGGAAC GCCGGCAAGG ACCTGTCCTT CGTGCCGCTG
CGCCCCGAAC GGGTCGTCGA AGTGCGCTAC GACCACATGG AGGGCAGGCG GTTCCGCCAT
ATGGCGCAGT TCAACCGGTG GAGACCGGAC CGCACGCCGC GCTCGTGCAC CTTCGATCAG
CTCGAGCAGC CGGTGAGTTT CAGCCTCGAC GACATCGGGC CGGGCCTCAC GCCGCGTGCA
GGGCGTCCAT ATAGGTCGTG A
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| Protein sequence | MAGMRLPVMP PLSPMLSKSV QQIPDGASYE PKWDGFRSIV FRDGDEIEFG SRNERPMTRY
FPELVAAARS ELPPRCVVDG EIVIATAGGL DFEALQLRLH PAASRVTMLA EKTPASFIAF
DLLALGDTDL TGRPFTERRA ALVDALAGAG PTFHVTPATR DIALATRWFD EFEGAGLDGV
IAKPVDGVYL PDKRTMFKIK HRRTADCVVA GYRLHKSGDD AVGSLLLGLY DSDGALASVG
VIGAFPMARR RALLAELQPL VTTFDEHPWN WAAHADPDVV RRHGGGSRWN AGKDLSFVPL
RPERVVEVRY DHMEGRRFRH MAQFNRWRPD RTPRSCTFDQ LEQPVSFSLD DIGPGLTPRA
GRPYRS
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