Gene Mflv_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1245 
Symbol 
ID4972571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1298499 
End bp1300739 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content69% 
IMG OID640455445 
Productglycerol dehydratase 
Protein accessionYP_001132515 
Protein GI145221837 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4909] Propanediol dehydratase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00307379 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.39875e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGCTGACG AGTTGGGCAG GTTCCGGGTC CTGAACTCGA AACCTGTCAA CCTCGACGGG 
TTCAGCGTCC CCGACGCCGC ACTCGGGCTC GTCGCGATGA GCAGCCCGCA TGACCCTGCG
CCGTCTCTGG TCATCAGGGA CGGGGCAGTA GTCGAACTCG ACTCCAAAGA CGTCGCCGAG
TTCGACGTCA TCGACGAGTT CATCGCCCGC TACGGCATCG ACCTCTCGGT TGCCGAAGAG
GCCATGGCTC TCGACGACGA GACGCTGGCA CGCATGGTGG TCGACATCAA CGTGCCGCGG
GCGGGGGTGG TGCGGCTGAT CGGCGGCACC ACCCCCGCCA AACTCGCCCG CGTCGTCGCC
CTCCTCTCGC CGGTGGAGAT GCAGATGGCG ATGGTCAAGA TGCGGGCCCG CCGCACACCC
AGCAACCAGG CCCACGTCAC CAACCAGCTC GACGATCCGC TGCTGATCGC CGCCGACGCT
GCCAGCGCGG TCGCCTACGG CTTCCGTGAG GTGGAGACGA CGGTCCCGGT GCTCGGCGAC
GCGCCGTCGA ACGCGGTGGC GCTGCTGATC GGTTCGCAGG TCGGGACGCC GGGCGCGATG
GCGCAGTGCT CGATCGAGGA GGCCCTGGAG CTGCGGCTCG GGTTGCGCGG ACTGACCAGC
TACGCCGAGA CGATTTCGAT CTACGGCACC GAGCAGGTGT TCATCGACGG CGACGACACC
CCGTTCAGCA AGGCGATCCT GACGTCGGCG TACGCGTCGC GGGGGCTGAA GATGCGGGTG
ACCAGCGGCG GGGGCGCCGA GGTGCTGATG GGTGCGGCGC AGAAGTGCTC GATCCTGTAC
CTGGAGTCGC GGTGCGTGTC GCTGGCGCGG GCGCTCGGAT CCCAGGGTGT GCAGAACGGC
GGCATCGACG GCGTCGGTGT GGTGGCCTCG GTGCCCGAGG GCATGAAGGA GCTGCTCGCC
GAGAACCTGA TGGTGATGAT GCGCGACCTC GAGTCGTGTG CGGGCAACGA CAACCTGATC
TCCGAGTCCG ACATCCGCCG CAGCGCTCAC ACGCTGCCGG TACTGCTCGC CGGAGCGGAC
TTCATCTTCT CGGGTTTCGG CTCGATCCCT CGCTACGACA ACGCCTTCGC GCTGTCGAAC
TTCAACTCCG ACGACATGGA CGATTTCCTG GTGCTGCAGC GGGACTGGGG TGCCGACGGA
GGGCTGCGCA CGGTGTCGCC GGAACACCTC GAGGCGGTGC GCCGACGCGC CGCGCAGGCC
GTGCAGGCCG TGTACCGCGA CCTCGGGCTG GCCGACTACG ACGATGCCCG GGTCGAGGAC
GTGGTGGCCG CCAACGGTTC CCGCGATCTG CCGGCCGGGC ATCCGAAAAT GGTCGCCGAG
GCCGCCGCCT CCATCGAGGC CCGGCAGCTG ACGGTGTTCG ACGTGATCGC CGCACTGCAC
CGGACAGGGT TCACCGAGGA GGCCGAGGCG ATCACGACGC TGACGCGCGA ACGACTGCGC
GGGGACCAGC TGCAGACCTC GGCGATCTTC GACGAGCAGT TCCGCGTGTT CTCCAAGCTG
ACCGACCCGA ACGATTACCG CGGCCCGGCA ACGGGTTACG CGCTCACCGA GCAGCGGCGC
GCCGAGATCG ACGCGATCCG GCAGGCCCGC AGCGGTGCGG AGCTGACCGT CGACCAGGAG
GAGCACCGCG GGCACGTCGT CGTCACCGAC GTCGAACCCG CACATCAGGG CAGCGACCCC
CGCGAGGTCT GCATCGGACT GTCGCCGGCG TGGGGCCGCA GCGTGTGGCT GACCCTGTGC
GGACTGACCG TCGGGGAGGT GTTGCGCCAG ATCGCCGCCG GGCTGGAGGA GGAGGGCTGC
ATCGCCCGCA CGGTGCGGGT CTGCTCGACC ATCGACACCG GCCTGATCGG GTTGACCGCG
GCCCGGCTGT CGGGATCCGG GATCGGGATC GGGTTGCAGG GCAAGGGTAC CGCGTTGATC
CATCGCCGGG ACCTGGCGCC GCTGGCCAAC CTGGAGCTGT TCAGCGTCGC GCCGCTGCTG
ACCGCGAAGA TGTACCGCGA GCTGGGCAAG AACGCCGCTC GCCATGCCAA GGGGATGGCG
CCGGTGCCGA TCTTCACCGG CGGCACCGAC GAGTCCATCT CGGCGCGCTA TCACGCCCGC
GCCGTCGCCC TCGTCGCGCT GGAGCGTGAC GCGTGCGAAC CCGGCCGGGC GCCCGTCACC
GTGAAGGTCG AGGCGCGATG A
 
Protein sequence
MADELGRFRV LNSKPVNLDG FSVPDAALGL VAMSSPHDPA PSLVIRDGAV VELDSKDVAE 
FDVIDEFIAR YGIDLSVAEE AMALDDETLA RMVVDINVPR AGVVRLIGGT TPAKLARVVA
LLSPVEMQMA MVKMRARRTP SNQAHVTNQL DDPLLIAADA ASAVAYGFRE VETTVPVLGD
APSNAVALLI GSQVGTPGAM AQCSIEEALE LRLGLRGLTS YAETISIYGT EQVFIDGDDT
PFSKAILTSA YASRGLKMRV TSGGGAEVLM GAAQKCSILY LESRCVSLAR ALGSQGVQNG
GIDGVGVVAS VPEGMKELLA ENLMVMMRDL ESCAGNDNLI SESDIRRSAH TLPVLLAGAD
FIFSGFGSIP RYDNAFALSN FNSDDMDDFL VLQRDWGADG GLRTVSPEHL EAVRRRAAQA
VQAVYRDLGL ADYDDARVED VVAANGSRDL PAGHPKMVAE AAASIEARQL TVFDVIAALH
RTGFTEEAEA ITTLTRERLR GDQLQTSAIF DEQFRVFSKL TDPNDYRGPA TGYALTEQRR
AEIDAIRQAR SGAELTVDQE EHRGHVVVTD VEPAHQGSDP REVCIGLSPA WGRSVWLTLC
GLTVGEVLRQ IAAGLEEEGC IARTVRVCST IDTGLIGLTA ARLSGSGIGI GLQGKGTALI
HRRDLAPLAN LELFSVAPLL TAKMYRELGK NAARHAKGMA PVPIFTGGTD ESISARYHAR
AVALVALERD ACEPGRAPVT VKVEAR