Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_1235 |
Symbol | |
ID | 4972561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 1289798 |
End bp | 1290577 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640455435 |
Product | short chain dehydrogenase |
Protein accession | YP_001132505 |
Protein GI | 145221827 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.183265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0279411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACGT CGTTGCAGGG CCGGTCGGCT GCCGTCACCG GAGGCAGCAA GGGTATCGGG CGAGGCATCG CCGAAACGTT CGCGCGCGCC GGCATCAACG TGGTCATCAC CGCGCGTACC CAGGACGACA TCGACGCCAC CGTCGCCGAC CTGGCCGGGC TCGCCGGCAC CGTCACCGGC GTCGCCGCCG ACGTCACCAG CCCCGAGGAC TGCCGCCGCG TCGTCGAGAC GGCGATCGAA CGCCACGGCG GACTGGACAT CGTGTGCCCC AACGCCGGGA TCTTCCCGTC CGGGCGGATC GCCGACCTGA CCCCCGACGA CATCGAGCAG GTCCTCGGCG TGAACTTCAA GGGCACCGTC TACATCGTGC AGGCCGCGCT GGACGCGCTG ACCGCCAGCG GTCACGGGCG CGTGATCATC ACGTCGTCGA TCACCGGACC CATCACCGGG TTCCCCGGGT GGTCACACTA CGGCGCGAGC AAGGCCGCCC AGCTCGGGTT CCTGCGCACC GCCGCGATCG AGTTGGCGCC GAAGAAGATC ACCGTCAACG CGGTGCTGCC GGGCAACATC CTCACCGAGG GCCTGGTCGA GATGGGCCAG AGCTACATCG ATCAGATGGC GGCCGCCGTG CCCGCGGGCA AGCTCGGCGA GGTCGCCGAC ATCGGCAATG CCGCACTGTT CTTCGCCACC GACGAGGCCG CCTACATCAC CGGGCAGTCC CTCGTGGTCG ACGGCGGCCA GATCCTGCCC GAATCGCCGG AGGCGCTCGC CGACCTCTGA
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Protein sequence | MFTSLQGRSA AVTGGSKGIG RGIAETFARA GINVVITART QDDIDATVAD LAGLAGTVTG VAADVTSPED CRRVVETAIE RHGGLDIVCP NAGIFPSGRI ADLTPDDIEQ VLGVNFKGTV YIVQAALDAL TASGHGRVII TSSITGPITG FPGWSHYGAS KAAQLGFLRT AAIELAPKKI TVNAVLPGNI LTEGLVEMGQ SYIDQMAAAV PAGKLGEVAD IGNAALFFAT DEAAYITGQS LVVDGGQILP ESPEALADL
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