Gene Mflv_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1235 
Symbol 
ID4972561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1289798 
End bp1290577 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID640455435 
Productshort chain dehydrogenase 
Protein accessionYP_001132505 
Protein GI145221827 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.183265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0279411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACGT CGTTGCAGGG CCGGTCGGCT GCCGTCACCG GAGGCAGCAA GGGTATCGGG 
CGAGGCATCG CCGAAACGTT CGCGCGCGCC GGCATCAACG TGGTCATCAC CGCGCGTACC
CAGGACGACA TCGACGCCAC CGTCGCCGAC CTGGCCGGGC TCGCCGGCAC CGTCACCGGC
GTCGCCGCCG ACGTCACCAG CCCCGAGGAC TGCCGCCGCG TCGTCGAGAC GGCGATCGAA
CGCCACGGCG GACTGGACAT CGTGTGCCCC AACGCCGGGA TCTTCCCGTC CGGGCGGATC
GCCGACCTGA CCCCCGACGA CATCGAGCAG GTCCTCGGCG TGAACTTCAA GGGCACCGTC
TACATCGTGC AGGCCGCGCT GGACGCGCTG ACCGCCAGCG GTCACGGGCG CGTGATCATC
ACGTCGTCGA TCACCGGACC CATCACCGGG TTCCCCGGGT GGTCACACTA CGGCGCGAGC
AAGGCCGCCC AGCTCGGGTT CCTGCGCACC GCCGCGATCG AGTTGGCGCC GAAGAAGATC
ACCGTCAACG CGGTGCTGCC GGGCAACATC CTCACCGAGG GCCTGGTCGA GATGGGCCAG
AGCTACATCG ATCAGATGGC GGCCGCCGTG CCCGCGGGCA AGCTCGGCGA GGTCGCCGAC
ATCGGCAATG CCGCACTGTT CTTCGCCACC GACGAGGCCG CCTACATCAC CGGGCAGTCC
CTCGTGGTCG ACGGCGGCCA GATCCTGCCC GAATCGCCGG AGGCGCTCGC CGACCTCTGA
 
Protein sequence
MFTSLQGRSA AVTGGSKGIG RGIAETFARA GINVVITART QDDIDATVAD LAGLAGTVTG 
VAADVTSPED CRRVVETAIE RHGGLDIVCP NAGIFPSGRI ADLTPDDIEQ VLGVNFKGTV
YIVQAALDAL TASGHGRVII TSSITGPITG FPGWSHYGAS KAAQLGFLRT AAIELAPKKI
TVNAVLPGNI LTEGLVEMGQ SYIDQMAAAV PAGKLGEVAD IGNAALFFAT DEAAYITGQS
LVVDGGQILP ESPEALADL