Gene Mflv_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1008 
Symbol 
ID4972335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1056988 
End bp1058028 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content70% 
IMG OID640455205 
ProductFis family transcriptional regulator 
Protein accessionYP_001132279 
Protein GI145221601 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.254492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGACG AATTCAGACA CAACGCCGAT CCCGGCGGCA AGACCGTCGT GTTCGCGCTC 
TACGACAAGG TGACGCTGCA GGATGTCGCG GCGCCCATGG AGATCTTCGC CCGCGCCAAC
GACTTCGGCG CGTCCTACCG GGTCCTGACC GTCTCACCCT CAGGCAGGCC GGTCGGGACG
ACGGCTTTCG CGACACTGAA CGTCGACGTG GCCCTCGACG CCGCACCCGA CGCCTTCGAC
ACGCTGTTGG TACCCGGCGG CGTTCCGGCG GACTTTTCGT TCACCCCGGG ACTGCACGAC
ATCCCCGAGG AGCCGACACC CGATTCCGTC GCCGACGCGT GCGACATGGT GCGCAGACTC
GCACCGAGGG CCCGCAGGAT CGCCTCGGTG TGCACCGGGT CGTTCGTGCT GGCCGCGCTG
GGCCTGCTGG ACGGCCGTCG GGCCACCACG CACTGGGCAC ACTGCCAGAC CCTGGCCCGC
CAGTACCCGG CGGTGATGGT CGACCCGGAC TCCCTGTTCG TGCAGGACGG GCCGTTCATC
ACGGGGGCCG GAATCACCGC CGGGATCGAC CTGGCGCTCG CCATGGTCGA AAGCGACTTC
GGACCCGCGG TGGCGCGGCG GGTCGCCCGC TGGATGGTGG TGTTCCTGCA ACGTCCCGGC
GGCCAGGCGC AGTTCAGCGT GTGGGCTGAA TCCGCGCTCC CGGTGACCGG CGGCCTGCGT
GCGGTCGTGG ATTCGGTGAT CGCCGATCCG GCCGGCGACC ATTCGCTCGC GGCGATGGCG
TCGCGCGCCG CGGTCAGTGA GCGCCACCTC GTCCGTGTCT TCCGCGACCA GGTGGGGATG
ACGCCCGCCC GGTTCGTCGA GCAGGCCCGT CTGGAGGCCG CGAAAGTGCT GTTGGCCACC
GGCGACCACA GCCAGGACTC CGTGGCACGC CGCAGCGGGT TCGGCACGCC GGACACGATG
CGGCGCACAT TCCGCCGCAA TCTCGGGATT TCACCCGGCG TGTACCGAAA CCGCTTCCGC
ACCACGGGCG TCGACGCGTA G
 
Protein sequence
MTDEFRHNAD PGGKTVVFAL YDKVTLQDVA APMEIFARAN DFGASYRVLT VSPSGRPVGT 
TAFATLNVDV ALDAAPDAFD TLLVPGGVPA DFSFTPGLHD IPEEPTPDSV ADACDMVRRL
APRARRIASV CTGSFVLAAL GLLDGRRATT HWAHCQTLAR QYPAVMVDPD SLFVQDGPFI
TGAGITAGID LALAMVESDF GPAVARRVAR WMVVFLQRPG GQAQFSVWAE SALPVTGGLR
AVVDSVIADP AGDHSLAAMA SRAAVSERHL VRVFRDQVGM TPARFVEQAR LEAAKVLLAT
GDHSQDSVAR RSGFGTPDTM RRTFRRNLGI SPGVYRNRFR TTGVDA