| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0871 |
|---|
| Symbol | |
|---|
| ID | 4972199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 910450 |
|---|
| End bp | 912897 |
|---|
| Gene Length | 2448 bp |
|---|
| Protein Length | 815 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640455069 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001132143 |
|---|
| Protein GI | 145221465 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCCGG ACGACCGGCA CACAGCAGTC CTCCCACCGT TCCGGGACGG ACCCCCGCCG
CCCACCCGCG ACCCGATCGA CGCGGTCAAG AGCGCGCTGG ATTCCCGCGA CCGGCGCCGG
CGTGACGGTG ATCGTCGGCG CGAGGGTGAC CAGCGACGCG GATCCGGTCC GCCCCCGCCT
CCGCCCGGTC CGCCGCGCCA CGGTGGCGGA GGACCCACCG GTGGTGACGG TCCGTCGGGG
CCGCCGCGCA GCCTGCGCGA GCAGATCAAC TGGACGTGGG TCCGTCGCGG ATCGCTGATC
GCGGCCGTGG TGCTCATCGT GTTGCCGCTG CTGACCTTCG GGATGGCGTA CATGATTGTC
GACGTCCCCA AGCCCGGGGA CATCCGGACC GCGCAGGTCT CGACGATCCT GGCCAGCGAC
GGCAGCGAGA TCGCGAAGAT CGTTCCGCCG GAAGGCAACC GGATCGACGT CAACATCGAC
CAGATCCCGG TGCATGTGCG CGACGCGGTG ATGGCCGCCG AGGACCGTGA CTTCTACTCC
AACCCGGGTT TCTCGTTCAC CGGGTTCCTG CGGGCGTTCA AGAACAACAT CTTCGGCGGC
GACCTGCAGG GCGGATCGAC GATCACGCAG CAGTACGTGA AGAACGCGTT GGTCGGTGAC
GCCCGCTCCG GTGTCGGCGG CGTCATCCGC AAGGCCAAGG AACTCGTCAT CTCGACCAAG
ATGTCGAGCG AGTGGTCCAA GGACCAGGTG CTGCAGTCCT ACCTGAACAT CATCTATTTC
GGGCGTGGTG CCTACGGTGT CGCGGCGGCG GCCAAGGCGT ACTTCGGCAA GCCGATCGAA
GAGGTCACGG TGTCGGAGGG CGCGCTGCTG GCGGCGCTGA TCCAGCGCCC GTCGGTGCTC
GACCCGGCCG TCGATCCCGA CGCGTCGGCC GTGCGCTGGA GCTGGGTGCT CGACGGCATG
GTGGAGATCG GCGCGCTCTC GGAGCAGGAC CGCGCCGCGC AGATCTTCCC GCCGACGATC
CCCCCGGATC AGGCCAGCAC ACAGAACCAG ACCACCGGAC CCAACGGCCT GATCGAACGT
CAGGTGGTCA GCGAGTTGAT GGAGATCTTC GACATCAACG AGCAGGCGCT GAACACCGAG
GGTCTGCAGA TCACCACGAC GATCGACCCG AAGGCGCAGT CCGCCGCGCA GGATGCGGTC
GAGGATTATC TCGACGGCCA GGACCCCGAC ATGCGGTCGG CGGTGGTGTC GATCGATCCG
AAGACCGGTG GCATCAAGGC GTACTACGGC GGCTCCGACG CGGCCGGATT CGACTTCGCG
CAGGCGGGTC TGCCGACGGG GTCGTCGTTC AAGGTCTTCG CGCTGATCGC CGCGCTCGAG
CAGGGGATGG GGCTGGGCTA CCAGGTCGAC AGCTCTCCGC TGGAGGTCAA CGGCATCAAG
ATCAGCAATG TCGAGGGCAG CAGCTGCGGG TCCTGCAACA TCGCCGAGGC GCTGAAGCGG
TCGCTGAACA CGAGCTACTA CCGGCTGATG CTGAAGCTGA AGAACGGTCC GCAGGACGTC
GCCGACGCTG CGCATCAGGC CGGTATCGCC GAGAGCATCC CGGGCATCGA GCACACGTTG
TCCGAGGACG GTCAGGGCGG ACCGCCGAAC AACGGCATCG TGCTGGGCCA GTACCAGTCC
CGCGTGCTGG ACATGGCGTC GGCGTACGCG ACGATCGCCG CGTCCGGCGT CTACCACAAG
CCGCACTTCG TGCAGAAGGT CGTGAACTCC GACGGGCAGG TGCTGTTCGA CGCCACCCAG
GAGGACAACA GCGGCGAGCA GCGCATCGAC CAGGCGGTCG CCGAGAACGT GATCGCGGCG
ATGCAGCCGA TCGCCGGCTA CTCGGGGCGT GCGCTGGCGG GCGGGCGTCC GTCGGCCGCG
AAGACGGGCA CCAACCAGCT CGGTGACACC GGTGAGAACC GTGACGCGTG GATGGTCGGC
TTCACCCCGT CGTTGTCGAC GGCGGTGTGG GTGGGCACGG TCGACGGCAC CAAGCCGCTG
GTGACCTCGG GCGGCGCCTC GGTGTACGGG TCGGGTCTTC CGGGTCAGAT CTGGAAGTCG
ACGATGGACA ACGCGCTCGA CGGCACCGAC AACGAGACGT TCCCCAAGCC CGAGGAGATC
GGCGGCTACG CCGGTGTCCC GCAGGCCCCG CCGCCTCCGC CGAGTTCGAC GGCACCGCCG
ACCCCGTCGG AGACGGTGAT CCAGCCGACG TTGGAGATCG CGCCGGGCAT CACGATTCCC
TGGGGTCCGC CGACGACCGT GCCCGTCGGC CCTCCCGGGG CGCCGCCGGT CCCTGAGACT
GCGCCGCCCG TTCCGCCGCC GGGCGCCCCG GTCCCGCCGG GTGCGCCGCC GCCACCGGGG
GCTCCGGTGC CGCCCGGCGC TCCGCCCGGT CCGCTTCCGC CCCCGTGA
|
|---|
| Protein sequence | MPPDDRHTAV LPPFRDGPPP PTRDPIDAVK SALDSRDRRR RDGDRRREGD QRRGSGPPPP
PPGPPRHGGG GPTGGDGPSG PPRSLREQIN WTWVRRGSLI AAVVLIVLPL LTFGMAYMIV
DVPKPGDIRT AQVSTILASD GSEIAKIVPP EGNRIDVNID QIPVHVRDAV MAAEDRDFYS
NPGFSFTGFL RAFKNNIFGG DLQGGSTITQ QYVKNALVGD ARSGVGGVIR KAKELVISTK
MSSEWSKDQV LQSYLNIIYF GRGAYGVAAA AKAYFGKPIE EVTVSEGALL AALIQRPSVL
DPAVDPDASA VRWSWVLDGM VEIGALSEQD RAAQIFPPTI PPDQASTQNQ TTGPNGLIER
QVVSELMEIF DINEQALNTE GLQITTTIDP KAQSAAQDAV EDYLDGQDPD MRSAVVSIDP
KTGGIKAYYG GSDAAGFDFA QAGLPTGSSF KVFALIAALE QGMGLGYQVD SSPLEVNGIK
ISNVEGSSCG SCNIAEALKR SLNTSYYRLM LKLKNGPQDV ADAAHQAGIA ESIPGIEHTL
SEDGQGGPPN NGIVLGQYQS RVLDMASAYA TIAASGVYHK PHFVQKVVNS DGQVLFDATQ
EDNSGEQRID QAVAENVIAA MQPIAGYSGR ALAGGRPSAA KTGTNQLGDT GENRDAWMVG
FTPSLSTAVW VGTVDGTKPL VTSGGASVYG SGLPGQIWKS TMDNALDGTD NETFPKPEEI
GGYAGVPQAP PPPPSSTAPP TPSETVIQPT LEIAPGITIP WGPPTTVPVG PPGAPPVPET
APPVPPPGAP VPPGAPPPPG APVPPGAPPG PLPPP
|
|---|
| |