| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0826 |
|---|
| Symbol | |
|---|
| ID | 4972154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 856684 |
|---|
| End bp | 857880 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640455024 |
|---|
| Product | DNA polymerase III subunit beta |
|---|
| Protein accession | YP_001132098 |
|---|
| Protein GI | 145221420 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGG CGACAACGGC TGGTCTGTCG GATCTGAAAT TCCGGCTGAC TCGCGAAGAC
TTCGCCGACG CTGTCGCATG GGTCGCGCGC AACCTGCCCT CCCGACCCAC CGTCCCCGTC
CTGGCCGGTG TGCTGCTGAC CGGATCCGAC GAGGGCCTCA CCGTGTCGGG ATTCGACTAC
GAGGTCTCGG CCGAGGTGCA GATCCCCGCC GAAATCGCTT CTCCGGGAAG CGTTCTCGTG
TCAGGGCGGT TGCTCTCCGA CATCGTGCGG TCGTTGCCGG CCAAGCCGGT GGACGTCAGC
GTCGAAGGCA CTCGCGTGTC GTTGACCTGC GGAAGCGCCC GCTTCTCGCT GCCCACCATG
GCCGTCGAGG ACTACCCCAC CCTGCCCACC CTGCCTGACG AGACGGGCGT CGTCTCGGCC
GATCTGTTCG CCGAGGCGAT CGGCCAGGTC GCGGTCGCCG CAGGCCGCGA CGACACGCTG
CCGATGCTGA CAGGGATCCG GGTCGAGATC TCCGGCGAGA AAGTCGTTTT GGCCGCCACC
GACAGATTCC GCCTCGCGGT GCGCGAGCTG ACCTGGTCGG CGGGCGCCGC CGGGGTGGAA
GCCGCGGTGC TGGTTCCGGC GAAGACACTC GCCGAGGCCG CCAAAGCCGG AACAGACGGC
ACCGAAGTGC ATCTGGCCCT CGGACAGGGT CCCACCGTCG GCAAGGAAGG TCTGCTCGGC
ATCCGCAGCA AGGGCAAGCG CAGCACCACC CGCCTGCTCG ATGCGGAGTT CCCGAAGTTC
CGCCAGCTGC TGCCCACCGA ACACACCGCC ATCGCGACCA TCGGTGTCGC CGAGCTGACC
GAAGCCATCA AGCGCGTGGC GCTGGTCGCC GACCGCGGTG CGCAGGTCCG GATGGAATTC
GCCGACGATG TGCTGCGTCT TTCGGCCGGC GCCGACGACG TCGGTCGCGC CGAGGAAGAT
CTTCCCGTGC AGTTCTCCGG GGACCCGCTG ACCATCGCTT TCAACCCGTC CTACCTGACC
GACGGTCTGG GGTCGCTGCA CGCCGAGCGG GTGACGTTCG GCTTCACCAC CCCCAGCCGT
CCGGCGGTTC TGCGTCCGGC CGGTGATGAT GACGGGAGCG CCGCAGGTAG CGGTCCGTAC
CCGGCAGCCC AGACCGACTA CGTGTATCTG TTGATGCCGG TGCGCCTTCC GGGCTGA
|
|---|
| Protein sequence | MNVATTAGLS DLKFRLTRED FADAVAWVAR NLPSRPTVPV LAGVLLTGSD EGLTVSGFDY
EVSAEVQIPA EIASPGSVLV SGRLLSDIVR SLPAKPVDVS VEGTRVSLTC GSARFSLPTM
AVEDYPTLPT LPDETGVVSA DLFAEAIGQV AVAAGRDDTL PMLTGIRVEI SGEKVVLAAT
DRFRLAVREL TWSAGAAGVE AAVLVPAKTL AEAAKAGTDG TEVHLALGQG PTVGKEGLLG
IRSKGKRSTT RLLDAEFPKF RQLLPTEHTA IATIGVAELT EAIKRVALVA DRGAQVRMEF
ADDVLRLSAG ADDVGRAEED LPVQFSGDPL TIAFNPSYLT DGLGSLHAER VTFGFTTPSR
PAVLRPAGDD DGSAAGSGPY PAAQTDYVYL LMPVRLPG
|
|---|
| |