| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0441 |
|---|
| Symbol | |
|---|
| ID | 4971517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 459941 |
|---|
| End bp | 462130 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640454646 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001131723 |
|---|
| Protein GI | 145221045 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.56016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.716089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAGA CCGCGAGCGC GTCCAAACTA GCCATCACCG ATGACCACCA GGACCTCGCT
GCGGCGGTGA CCGGCCAGCT GGATCGGCTG AAAGCGCTGG TCCTGGCCCG AGCGACCCTC
GATGCGGCCG ACACCGACGG TGCGTCGAAC CCGAGCGACC TGTGGTCGGC GGCCACCGGT
CTCGGCTGGA CCGGATTGGC TCTCGCCGAG GACGTCGGCG GGTCGGGCTT CGGCCTGGCC
GAGCTGGCCG TCGTCGTCGA GTGCCTCGGC CACCAGCTCG CCCCCGGCCC GTTCCTTACC
AGCGTGTCGG CGGCGGTGGT CATCGACCGG TGTGCGCCCG ACTCCGTCCG CGCCGAACTG
CTGCCGGGAT CGGCGTCGGG AGACACCGTC GCAGCCCTCG GAATCTCCGG CACGGTCGCC
GTCGGCGCCG ACAACACCGC CACCGGAGAA TGCGCCACCG TTCTCGGCGC GCCCGACGCC
TCGCTGTTGG TTCTGGTCGC CGGCGACGAC GTCGTGATCG TCGACGCCGG CGACGACGGT
GTCACCGTCA CCCGACTGGA CTGCCTCGAC ACCACCCGCA GCATCGGCTC GGTGACCCTC
GACGGCGTCG CCGTTCCCGC AGACCGCATC CTGCGCGGTG CCGCCCGCGA CGCGCGCACC
GTGTTCCGGA CCCTCACGGC GGCCGAGGCC GTCGGCGTCA GTTGGGCCGC GCTGGACATG
GCCGTCGAGT ACGCCAAGGT CCGCGAGCAG TTCGGCCGCA CCATCGGCAC CTTTCAGGCG
GTCAAACACC ACGCCGCCAA CATGCTCGTC AGCGCGGAGA CCGCGACGGC CGCGGTGTGG
GACGCCGCGC GCGCCGATGA TGTCGACAGC GCCTGGTTCG CGGCGGCGGT GGCCGCAGCG
CTCGCGATCA AGGCCCAGGT CTTCAACGCG CAGAACAACA TTCAACTCCA CGGCGGCATC
GGGTTCACGT GGGAGCACGA CGCCCACCTC TATCTCCGCC GCGCGCGCAC GCTGGCGGCG
CTGATGGCCG ACGGTGTCGA CCCGCTGATC GACATCGTCG ACGGCCAGCG CACCGGTCGC
GCCCACGGCG CGTCGTTCAC CCTGCCGCCC GAGGCCGACG AGTACCGCAC CCAGGCGCGC
GAGGCCGCCG AAGCGGTCCG GCGACTGCCC GCCGAGCAGC AGCGCGACTA TCTGGTCGAC
TCCGGATACC TCGTCCCGCA CTGGCCGAAG CCGTGGGGAC GGGCAGCCGA CGTGCTGGAA
CAGCTCGTCA TCGAGGAGGA GTTTGCCGCG ATCGAGCGCG CCGACATGGG CATCACCGGG
TGGGTCGCGC TCACCATCGC CCAGGCCGGC ACCGATGAGC AGCGCGAACG CTGGGTCGAA
CCGGTGCTGC GGGGCCAGGT GATGTGGTGC CAGCTGTTCT CCGAGCCGGG CGCGGGCTCC
GATGCCGCCG CGGTGCGCAC GTCGGCGAAG AAAGTCGACG GCGGCTGGCG GGTCACCGGC
CAGAAGGTCT GGACCAGCCT CGCGCACATG TGCCAGTGGG GTCTGGCCAC CGTGCGCACC
GACCCCGACG CCGCCAAACA CGCGGGCGTG ACGATGATGG CGATCGACAT GAACGCCGAC
GGCGTGACGG TCAACCCGCT GCGCGGCCTC ACCGGCGACT CCCACTTCAA CGAGGTGTTC
TTCGACGACG TGTTCGTGCC CGACGCGGAT GTCGTCGGCG ACGTCAACAA GGGCTGGCTG
GTCGCGCGGG CCACGCTGGG CAATGAGCGG GTTTCCATCG GCGGTGGATC CGGCGGGGTC
ACCGGCACCA CCCCCGATCA TCTGATCAAG CTGCTCGACA GCTCGCCGGA CAGGGCCCCG
ATGTTCGTCC GGCAGGCCGG CGAGGTGATC GCCGAGATCC ATTCGCTGCG ACTGCTGAAC
CTGCGCCGCG CCACCCGCGC CATCTCCGGA GCCGAGCCCG GGCCGGAGGG CAACGTGACG
AAGCTGGTGG TCGCCGAGTC GGGCCAGCAT CTCACCGAGC TCGCGTTCGA ACTGGCGGGC
ACCGCCGCGG TCGTCGAGCA GATGCCCCAG CTCACGCGCA GCTACCTGGG CAACCGGGCG
ATGACGATCG CAGGCGGCAC GTCGGAGATC ACCCGCAACA CAATTGCCGA GCGGATCCTG
GGTCTGCCGC GTGATCCGCT GCTTCGCTGA
|
|---|
| Protein sequence | MSKTASASKL AITDDHQDLA AAVTGQLDRL KALVLARATL DAADTDGASN PSDLWSAATG
LGWTGLALAE DVGGSGFGLA ELAVVVECLG HQLAPGPFLT SVSAAVVIDR CAPDSVRAEL
LPGSASGDTV AALGISGTVA VGADNTATGE CATVLGAPDA SLLVLVAGDD VVIVDAGDDG
VTVTRLDCLD TTRSIGSVTL DGVAVPADRI LRGAARDART VFRTLTAAEA VGVSWAALDM
AVEYAKVREQ FGRTIGTFQA VKHHAANMLV SAETATAAVW DAARADDVDS AWFAAAVAAA
LAIKAQVFNA QNNIQLHGGI GFTWEHDAHL YLRRARTLAA LMADGVDPLI DIVDGQRTGR
AHGASFTLPP EADEYRTQAR EAAEAVRRLP AEQQRDYLVD SGYLVPHWPK PWGRAADVLE
QLVIEEEFAA IERADMGITG WVALTIAQAG TDEQRERWVE PVLRGQVMWC QLFSEPGAGS
DAAAVRTSAK KVDGGWRVTG QKVWTSLAHM CQWGLATVRT DPDAAKHAGV TMMAIDMNAD
GVTVNPLRGL TGDSHFNEVF FDDVFVPDAD VVGDVNKGWL VARATLGNER VSIGGGSGGV
TGTTPDHLIK LLDSSPDRAP MFVRQAGEVI AEIHSLRLLN LRRATRAISG AEPGPEGNVT
KLVVAESGQH LTELAFELAG TAAVVEQMPQ LTRSYLGNRA MTIAGGTSEI TRNTIAERIL
GLPRDPLLR
|
|---|
| |