| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0012 |
|---|
| Symbol | |
|---|
| ID | 4971635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 11644 |
|---|
| End bp | 12582 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640454218 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001131296 |
|---|
| Protein GI | 145220618 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.261504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTCC CCGGTCCGCG CACGCGGTGC GGCCGTCGGC ATCGCCGGTC AGAATGCACT
GCGGCGGAAC GGACTTCAGG CATGACGACG GCGGATCAGC CGGTTCGCCG AGATGACTCC
GTCCATGCCG TGCAGGACTG GGTCGGGGGC TATGTGCGCC GCCATCCGCT GGCGTCGCTG
GCCACGGTCG GAGACCAGTT CGTCCTGGGT GTCCGCACCC TGCAGTGGTT CTTCGTCGAC
CTCTTCACCG GGCGTTTCCA GTTTCAGGAG TTCGTGCGCC AGGGTGCGTT CATGGCCGGC
ACCGCTGTGC TGCCCACCGT CCTGGTCGCG CTGCCGATCG GGGTGACGCT GTCGATCCAG
TTCGCGTTGC TCGCCGGTCA GGTCGGCGCG ACGTCGCTGG CCGGTGCGGC CAGCGGGCTG
GCCGTGATCC GGCAGGCCGC GTCGTTGACC GCCGCGATCC TGATGGCCGC GGCGGTCGGC
TCGGCGATCA CCGCGGACCT CGGTTCCCGC AAGATGCGCG AGGAGACCGA CGCCATGGAG
GTCATGGGCG TGTCGGTGAT CCGCCGCCTC GTGGTGCCGC GTTTCGCCGC AGCGATCATG
ATCGGCGTCG CGCTGACCGG CGTGGTGTGC TTCGTCGGCT TCCTGGCCAG CTATCTGTTC
AACGTGTACT TCCAGAACGG CGCACCGGGC AGCTTCGTGG CGACGTTCGC GTCGTTCGCG
ACCACCGGCG ACATGATCGT GGCACTGGTC AAGGCGGTCA TCTTCGGCGC CATCGTGGCG
ATCGTGTCCT GTCAGAAGGG GCTGTCCACC CAGGGCGGGC CGACCGGGGT CGCGAACTCG
GTCAACGCCG CCGTCGTCGA ATCCATCCTG GTGCTCATGG TCGTCAACGT CGCGATCAGC
CAGCTCTACA TTCTGATGTT CCCGCGGGTG GGCCTGTAG
|
|---|
| Protein sequence | MRLPGPRTRC GRRHRRSECT AAERTSGMTT ADQPVRRDDS VHAVQDWVGG YVRRHPLASL
ATVGDQFVLG VRTLQWFFVD LFTGRFQFQE FVRQGAFMAG TAVLPTVLVA LPIGVTLSIQ
FALLAGQVGA TSLAGAASGL AVIRQAASLT AAILMAAAVG SAITADLGSR KMREETDAME
VMGVSVIRRL VVPRFAAAIM IGVALTGVVC FVGFLASYLF NVYFQNGAPG SFVATFASFA
TTGDMIVALV KAVIFGAIVA IVSCQKGLST QGGPTGVANS VNAAVVESIL VLMVVNVAIS
QLYILMFPRV GL
|
|---|
| |