| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3323 |
|---|
| Symbol | |
|---|
| ID | 4955599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3602628 |
|---|
| End bp | 3604520 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640182514 |
|---|
| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
|---|
| Protein accession | YP_001114648 |
|---|
| Protein GI | 134301152 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
|---|
| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGTTACC ATGCTGGCGA TTATGATGTT ATTATAGTAG GTGCTGGTCA TGCCGGATGT
GAAGCAGGCC TTGCTGCTGC GAGAATGGGC TGCAAAACTC TAGTATTAAC ACTAAATTTA
GATAATATAG CATTAATGCC TTGTAATCCT GCGGTTGGGG GACCGGCTAA ATCACATCTG
GTTAAAGAAA TCGACGCCCT GGGTGGCCAA ATGGGCTTAA CCACAGACTT AGCTGCAATC
CAGATGAGAA TGTTAAATAC TGGTAAAGGA CCGGCTGTTT ATGCCCTAAG GGCCCAGGCA
GATAAGGTAA AATACCAGCA GTTAATGAAA AAAAACTTAG AAACTCAGGA AAATTTAGAT
GTAAAGCAAT TATTGGTGGA AGAAATTTTA GTTAAAAATG GCCGTGTTAC CGGTGTAGCA
ACTCAGATAG GGGCAGAATT TTCTGCTCGG GCAGTTGTTG TTACCACAGG AACTTATTTA
AAGGGAAGAA TTATTATTGG CAATGTACAT TTTCCTGGTG GGCCAAACAG TCAGTTTCCT
TCTGTAAACC TGAGTGAAAA CTTAAGAAGC TTAGGTTTAG AATTAGGTCG TTTCAAAACA
GGTACACCGG CTAGGGTGGA TCGTCGTACC ATTGATTTTA CAAAAATGAC CATTCAGCCA
GGAGATGAAG AAGTACATAA TTTTTCTTAT ATATCTCCGG TTACCCAACG AGAGCAGGTT
CCCTGTTGGT TAACTTATAC CACAGAAAAG ACCCATGAAA TTATAAGAGA GAATTTACAT
CGGTCTCCCC TTTACTCTGG AATTATTGAA GGAGTTGGTC CAAGATACTG CCCCTCAATA
GAGGATAAAA TTGTAAGGTT TGCCGATAAG CCGCAACATC AAATCTTTGT AGAGCCAGAA
GGATTGCATA CCTATGAGAT GTATGTTCAG GGAATGTCAA CTAGCCTTCC TCCTGATGTA
CAATTAAAAA TGTATAGAAC CATACCTGGT ATGGAAAATG TTAGTATTAT GAGGCCGGCC
TATGCCATTG AGTATGACTA TATTGTACCG ACCCAACTTA GAACCACCCT GGAAACGAAA
GAAATTATAG GCTTGTATGC TGCAGGGCAG ATTAATGGAA CTTCTGGCTA TGAAGAAGCA
GCTGCCCAGG GAATTATGGC TGGAATTAAT GCTGCATTGC AGGTTCAGGA AAAGGACCCC
TTTTACCTCT CCAGGTCAGA AGCCTATATA GGTGTACTAA TTGATGATCT GGTTGTTAAA
GGTACCAATG AACCTTACCG CCTTATGACT GCCAGGGCAG AATATCGTTT ATTACTTCGT
CAGGATAATG CTGATCACAG ATTGACTCAA AAGGGCTACA ATATAGGGCT TGTAAGTCAA
GTGCGATATG ATCACTATAT GAACAAATGG CAATCCATTA GCAAAGAAAT GGAGAGGCTT
AAAACCATTG TTATACCTGC CAATGAAGAG ACAAATAAGG TATTAAAAAG TCTTGAATCA
AGTGAAATTA CTCAAAACAC TCCCTTCATT AATTTATTAA GGAGACCTGA AATAAAATAT
AATACCTTGG CTGGTCTCTC TGACCATTTC CTTGATTTAC CCCAAGAGGT TATTGAGGAA
GTTGAGATTG AAGTTAAATA TGAAGGATAT ATTAAAAAAC AGTTGGCCCA GGTTGAAAGA
TTTGAAAAAC TAGAAGGTCG TATATTGAAC ATCGATATTG ACTATGAAAT GATTAAAGGA
CTTTCCTTGG AAGCCAGACA AAAGTTAAAA AAGTTCAAAC CAACCTCCAT TGGACAGGCT
TCTCGTATCT CTGGAGTAAG CCCTGCAGAT ATTTCCGTAT TGTTAATTTG GTTAGAGCAA
GAACGGCGAA AGATTGCCGG AGGGGATGCT TAA
|
|---|
| Protein sequence | MRYHAGDYDV IIVGAGHAGC EAGLAAARMG CKTLVLTLNL DNIALMPCNP AVGGPAKSHL
VKEIDALGGQ MGLTTDLAAI QMRMLNTGKG PAVYALRAQA DKVKYQQLMK KNLETQENLD
VKQLLVEEIL VKNGRVTGVA TQIGAEFSAR AVVVTTGTYL KGRIIIGNVH FPGGPNSQFP
SVNLSENLRS LGLELGRFKT GTPARVDRRT IDFTKMTIQP GDEEVHNFSY ISPVTQREQV
PCWLTYTTEK THEIIRENLH RSPLYSGIIE GVGPRYCPSI EDKIVRFADK PQHQIFVEPE
GLHTYEMYVQ GMSTSLPPDV QLKMYRTIPG MENVSIMRPA YAIEYDYIVP TQLRTTLETK
EIIGLYAAGQ INGTSGYEEA AAQGIMAGIN AALQVQEKDP FYLSRSEAYI GVLIDDLVVK
GTNEPYRLMT ARAEYRLLLR QDNADHRLTQ KGYNIGLVSQ VRYDHYMNKW QSISKEMERL
KTIVIPANEE TNKVLKSLES SEITQNTPFI NLLRRPEIKY NTLAGLSDHF LDLPQEVIEE
VEIEVKYEGY IKKQLAQVER FEKLEGRILN IDIDYEMIKG LSLEARQKLK KFKPTSIGQA
SRISGVSPAD ISVLLIWLEQ ERRKIAGGDA
|
|---|
| |