Gene Dred_3304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3304 
Symbol 
ID4956026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3586904 
End bp3587863 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content38% 
IMG OID640182495 
Productmembrane protein-like protein 
Protein accessionYP_001114629 
Protein GI134301133 
COG category[S] Function unknown 
COG ID[COG4241] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0389216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTTCCT TTCGTGATAC CCGTGCCTTG GTTGAAGGTG CATTTATGGC AGGAATTACG 
GCCATGCTCG GTTTATTGGG GATGTTTATA CCCCCGTTTT TTTTAGTTAT CAGTATGTTA
ATGCCAATAC CCCTGGCAGT ATTGGTAAGA AGAAGAGATT TAAAGGTTGC ATTTCTATCA
CTGGTGGTTA CAGGTCTTTT GATGATGGTC ATCTATCCAA ACCCCATACA AGTACTGGTG
ATGTTTATAC AGTTTGGCCC TTTGGGTCTA GTGCTGGGCC TTTTATATAA AAATTATGTT
TCAGCGGGAC ATGCCTTGAT AACAGCATCC ATTGTATCGG CCATTGCTTC TATCATTGTT
ATTACGTTAG GTATTTTTGT AACAGGACTA AACCTAGATT TAATTCAATC AGCCTTAAAT
GAATCACTCA ATAGAGTTTT TACAACGTAT CAAGAAATCG GTTATCCGGT ACCCGCAGAT
CAGCAGGCTT TGATGAGAAC AAGCATAAAA ACCTCCGTTT TGCTATTACC TGCTGCCTAT
CTTATATTTG CGGTGTTTTC TACGGTCCTT ACCTACATGG TGGGAAGTAA GGTCCTGAAA
AGGCTTAATT ACAGGGTTAA TAATTTACCA CCCTTTAGCC AGTGGCGGTT GCCTTGGTAT
AGTATCTGGG GGATTATCCT TGGTTTACTC TTTCTTCTGA TCGGTGATAA ATTTGATTTT
TCTGTTGTTA AAATAATTGG TCAAAATCTG TTAACCATCT TCGGATTTAC TTTCTTTATT
ATTGGCCTGG CAGTGGTTGT ATATTATTTC AAGCAATTAC AGTTATCAAA ACCCTTTAAA
ATAATGCTTA CTGTACTCCT GATTTTATAC ATTGGTTTTA TGTATATGGC TGTGGTACTA
TTGGGTCTTG TGGATACCAT TTTAAATCTT CGGAGACCAA TACAGAAAAA AGACAAATAA
 
Protein sequence
MASFRDTRAL VEGAFMAGIT AMLGLLGMFI PPFFLVISML MPIPLAVLVR RRDLKVAFLS 
LVVTGLLMMV IYPNPIQVLV MFIQFGPLGL VLGLLYKNYV SAGHALITAS IVSAIASIIV
ITLGIFVTGL NLDLIQSALN ESLNRVFTTY QEIGYPVPAD QQALMRTSIK TSVLLLPAAY
LIFAVFSTVL TYMVGSKVLK RLNYRVNNLP PFSQWRLPWY SIWGIILGLL FLLIGDKFDF
SVVKIIGQNL LTIFGFTFFI IGLAVVVYYF KQLQLSKPFK IMLTVLLILY IGFMYMAVVL
LGLVDTILNL RRPIQKKDK