| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3298 |
|---|
| Symbol | |
|---|
| ID | 4957860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3578680 |
|---|
| End bp | 3580032 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640182484 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001114623 |
|---|
| Protein GI | 134301127 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000268991 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACATA AATTTAAATT TGACGGTGTT CGAATTGTAC TGGATGTCCA CAGTGGCTCT
GTCCATGTGG TGGATGAAGT GGTGTGGGAT ATTTTAGAGG AATACCAAAA GCACCCCAAA
GAAGAAATTC AACAAAGGTT TGCAGATAAA TATTCACCGG ATGAAATTGA GCAGGCTCTG
GAGGAAATAA AATCATTAGT GGACGAAGGA TTTTTATTTA CCACCGATCC CCATCAGGAG
GGATATCGGC CCAAAAGGGA CGGAGTGGTA AAGGCCTTAT GCCTCCATGC AGCCCATGAT
TGCAACTTAC GTTGCAAATA TTGTTTTGCC GGAGAGGGCA AATTTGGGGG TCCTTCCGGT
CTATTATCGG CGGAAACAGG GCGTGCTGCC ATCGATTTTC TTATCCAACA TTCTGGGAAT
CGTAAACATG TGGAGATAGA CTTCTTCGGC GGTGAGCCTT TGTTAAACTT TAAGGTTATT
AAAGAACTGG TACCCTATGG CAGGGAACGG GCGAAGGAAG CTGGCAAAGA GATTAAATAT
ACCCTGACCA CCAATGGTGT TCTTTTAAAT AAAGAAGTTC AACAATTCCT GATTGACAAT
CAAATGGCAG CCGTGCTAAG TCTGGACGGT CGTCCGGAAG TACACGATCA AATGAGACCT
GCTCCTGGTG GCAGGGGTTC TTATACCAGG GTAGTATCTG CCTTTCAGGA ATATGTACAA
CAAGAACCAC CGGCTGGCTA TGTTATCCGG GGAACCTTTA CCCGCCATAA TTTAGACTTT
AGCCGCGATG TTTTGCATAT GGCCGAACAG GGCTTTAAAG ATATCTCCGT TGAGCCCGTC
GTAGCAGGAA GTGACACAGA TTATGCCTTT AAGCCTGAAG ATGTGCCTAT GCTTATGGAA
GAATACGACA AACTAACTAG GGAACTCCTA GTTCGGATGG AGGCAGGCGA GCCGCTTAAT
TTTTTTCACT TTAATATTGA CCTTAATGGA GGCCCCTGTC TGCCTAAGCG TTTATCTGGT
TGCGGAGCAG GCTACGAATA CCTTGCAGTT ACCCCGGAGG GCGAGCTCTA CCCTTGCCAC
CAGTTTGTGG GTAAGCCGGA ATTTTTAGTG GGCAATGTTA AAGATGGGGT ACAAAAACAG
GAGATTATTG AAGAGTTCCG TCAGGCCCAT ATCTATAACA AAGAGGAATG TGTGAACTGC
TGGGCTAAGT TTTACTGTAG CGGGGGTTGC CATGCCAATG CCCATACCTT TAATAATGAC
ATGTTAAAAC CATATCAATT GGGTTGCCAA TTGGCGAAGA AGCGTTTTGA GTGCGCCATT
TACCTAAAGG TTAAACAAGC CGGTTTAGCA TAA
|
|---|
| Protein sequence | MIHKFKFDGV RIVLDVHSGS VHVVDEVVWD ILEEYQKHPK EEIQQRFADK YSPDEIEQAL
EEIKSLVDEG FLFTTDPHQE GYRPKRDGVV KALCLHAAHD CNLRCKYCFA GEGKFGGPSG
LLSAETGRAA IDFLIQHSGN RKHVEIDFFG GEPLLNFKVI KELVPYGRER AKEAGKEIKY
TLTTNGVLLN KEVQQFLIDN QMAAVLSLDG RPEVHDQMRP APGGRGSYTR VVSAFQEYVQ
QEPPAGYVIR GTFTRHNLDF SRDVLHMAEQ GFKDISVEPV VAGSDTDYAF KPEDVPMLME
EYDKLTRELL VRMEAGEPLN FFHFNIDLNG GPCLPKRLSG CGAGYEYLAV TPEGELYPCH
QFVGKPEFLV GNVKDGVQKQ EIIEEFRQAH IYNKEECVNC WAKFYCSGGC HANAHTFNND
MLKPYQLGCQ LAKKRFECAI YLKVKQAGLA
|
|---|
| |