| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3294 |
|---|
| Symbol | |
|---|
| ID | 4957815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3574124 |
|---|
| End bp | 3575377 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640182480 |
|---|
| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_001114619 |
|---|
| Protein GI | 134301123 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
|---|
| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCAAAC TCATAATAAC AGGAGGACAA CCGCTCCATG GAAAAATAAA GGTAAGTGGT
GCAAAAAACG CTTCCCTCGC TATTTTATGC GGTGCATTAT TGGCGCAGGA TGAGGTTGTT
TTAGATAACA TTCCGGATAT TAGCGATGTT CGTATTTTGT TAGAAATAAT GGGAACCATG
GGGGTAAAAG TCCGCTGGCT AGGAGAAGAA TCTTTATCTC TAAAAAGCCC AGACCGGATT
ATTGAAGAAG CACCCTATGA TTTGGTAAAG CAGTTAAGGG CATCCAACCT TTTATTGGGT
CCTATGTTGA CCCGTTATGG CAAAGCTTCG GTATCTTTAC CCGGTGGGTG TAACATAGGT
GTTCGTCCCA TGGACTTGCA TTTCAAAGGT CTCATGGGCC TTGGTGCGGA AATGAATTTG
GAACGGGGTA CCATACAGGG AAAAACCGGA CGACTTACTG GGGCCAGGGT TTATTTAGAC
TTTCCCAGCG TAGGTGCCAC CGAAAACATT ATGATGGCTG CTTGCTTAGC CGATGGCCAG
ACCATTATTG AAAATGCTGC TAAAGAGCCT GAAATTGTAG ATTTAGCTAA CTTCTTAAAC
GCTCTGGGTG CTAAGGTTCG TGGAGCAGGA ACTGATTTAA TTAAAATTGA AGGGATGACT
CACTTAAAGG GTGGTCGTTA CACTGTTATC CCTGACAGGA TTGAAGCAGG AACCTTTATG
GTGGCTGCGG CAGCTACCCG GGGTGAAGTT TTGCTAGAAA ATGTTATACC ACGGCATTTG
GAACCCTTAA CTGCAAAATT GCGGGAAGCG AATATAGAAG TAGAAGTTAG TGAAGACACC
ATTCTGGTTA ATGCAACGGA TGTTCAGACA AAAAGCATTG ATATTAAAAC CATGCCCTAT
CCGGGCTTTC CCACAGATAT GCAGTCTCAA ATGATGTCCT TCCTAGCAAC TGTGTCCGGA
ACCAGCATTA TTGTTGAAAA TATCTTTGAA AATCGTTTTA GGGTTGCTGA TGAATTAAAA
TGCATGGGTG CTAACATAAA GGTCGAAGGG CGCATGTCTG TTATTGAAGG AGTACCCTCC
CTACAGGGAG CCAAGGTTAA GGCCTCAGAC CTACGGGCTG GTGCTGCACT TGTTATCGCT
GGACTCATGG CCAATGGGGA TACTGAATTG AGTAATGTTC ACTATATTGA CCGTGGCTAC
ACCAACCTTG AGCAAAAACT AACCTCCCTT GGTGCCCTTA TCCGAAGAGC ATAG
|
|---|
| Protein sequence | MSKLIITGGQ PLHGKIKVSG AKNASLAILC GALLAQDEVV LDNIPDISDV RILLEIMGTM
GVKVRWLGEE SLSLKSPDRI IEEAPYDLVK QLRASNLLLG PMLTRYGKAS VSLPGGCNIG
VRPMDLHFKG LMGLGAEMNL ERGTIQGKTG RLTGARVYLD FPSVGATENI MMAACLADGQ
TIIENAAKEP EIVDLANFLN ALGAKVRGAG TDLIKIEGMT HLKGGRYTVI PDRIEAGTFM
VAAAATRGEV LLENVIPRHL EPLTAKLREA NIEVEVSEDT ILVNATDVQT KSIDIKTMPY
PGFPTDMQSQ MMSFLATVSG TSIIVENIFE NRFRVADELK CMGANIKVEG RMSVIEGVPS
LQGAKVKASD LRAGAALVIA GLMANGDTEL SNVHYIDRGY TNLEQKLTSL GALIRRA
|
|---|
| |