Gene Dred_3242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3242 
Symbol 
ID4957522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3525165 
End bp3526064 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content37% 
IMG OID640182430 
ProductABC transporter related 
Protein accessionYP_001114569 
Protein GI134301073 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAAA TAAAAGATTT AAGTAAATCC TTTGAGGATT TGGCAGCGTT AAAAAATGTT 
AACATCAAGG TAAATAAAGG TTCTGTTTAT GGTTTAGTGG GGTCCAATGG GGCAGGGAAA
ACCACTCTCC TCAAAACCAT GGTGGGCGTT TATCAGGGAG ATCAGGGGAC CTGTTGTATT
GAAGGACAAG AGGTCTTTGA GAATGTGGAG ATCAAAGCAA AAATTATTTT CATCCCAGAT
GCATTGTATT TTTTTTCTAC CTACTCCGTA AGGGATATGG CAAAGTTTTA TAGTAATATT
TATCCTTCCT GGAACCAGCA ACGTTTTAAT AAGCTAAAAG AGGCCTTTGG TATTGATATT
AATAAAAAAA TCAATCGACT CTCTAAGGGG ATGCAAAGAC AAGTAGCCTT TTGGCTTGCT
TTGTCTACCA TGCCTGAATA TTTGATTTTA GATGAACCTT TGGATGGTCT GGACCCTGTC
ATGAGGCAGA AAGTAAAAAA CCTAATCATT CAAGATGTGG CAGAGAGAGA AATGACCGTT
TTAATTTCCT CCCATAATTT AAGAGAACTT GAGGATCTCT GTGACACCAT AGGTATTTTG
CACCAGGGCA CCTTGGTTTT AGAGAAAGAG CTAGATGACC TTAAGTCTGA TGTACATAAA
ATTCAGGTGG CCTTTAAAGA AGATGTGCCT GAGCAAATTT TGCAGGATGC CCAAATTTTA
TATGAAGAGA TTCGGGGCAG TGTGAAGCTT TTTATTATTC GTGGTAATAA AGAGGAGCTT
ACAAAACAGT TTAATAAACA TAATCCAATG ATTTTAGATA TTTTACCCTT GACCCTGGAA
GAAATATTTA TCTATGAGAT GGGAGGGATC GGCTATGCCA TTGAAAACAT CATTATTTAA
 
Protein sequence
MIEIKDLSKS FEDLAALKNV NIKVNKGSVY GLVGSNGAGK TTLLKTMVGV YQGDQGTCCI 
EGQEVFENVE IKAKIIFIPD ALYFFSTYSV RDMAKFYSNI YPSWNQQRFN KLKEAFGIDI
NKKINRLSKG MQRQVAFWLA LSTMPEYLIL DEPLDGLDPV MRQKVKNLII QDVAEREMTV
LISSHNLREL EDLCDTIGIL HQGTLVLEKE LDDLKSDVHK IQVAFKEDVP EQILQDAQIL
YEEIRGSVKL FIIRGNKEEL TKQFNKHNPM ILDILPLTLE EIFIYEMGGI GYAIENIII