Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_3223 |
Symbol | |
ID | 4957431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 3504000 |
End bp | 3506192 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640182411 |
Product | DNA topoisomerase III |
Protein accession | YP_001114550 |
Protein GI | 134301054 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAAAA GTTTGGTATT AGCAGAAAAG CCCTCTGTGG CAAGGGACAT AGCCAGGGTT TTAAACTGTT ATAAAAAAGG AAATGGTTAT TTAGAAGGGG ACAAATATAT TGTCACCTGG GCGTTGGGCC ATCTGGTTAC TTTGGCCGAC CCGGAGGTCT ATGATGAAAA ATATAAGTCC TGGCGATTAG AAGATTTACC CATGCTGCCC TCCCCTTTGA AACTGGTGGT TATCCGGCAA AGCAGCAAGC AGTTTCAGAT CGTTCGGGAG CAAATGAACA GGAAAGATCT GCGAGAGATC ATTATTGCCA CGGATGCCGG GCGAGAAGGG GAACTGGTGG CCCGGTGGAT TATTGAAAAG GCTAGGGTGG TCAAACCCCT GAAACGCCTG TGGATTTCCT CGGTCACAGA CAAGGCCATT CAAGACGGCT TTAAAAAGCT AAGGGATGGT AAAGAGTATC AAAATCTTTA TGCAGCGGCG GTGGCCCGGG CAGAGGCAGA CTGGTTTGTA GGCATTAACG CCAGCCGTGC CCTAACTTGT AAATTCAATG CACAACTTTC CTGCGGCAGG GTCCAAACCC CAACCCTAGC CATCATTGCC AAGCGGGAAG AGGAAATAAG AAACTTCAGA CCCAAAACCT TTTACGGTAT AACTGTCGTA ACAGACCAAC TAAAATTAAC CTGGCAGGAC CGTCAGAGTA AAGATATAAA GACCTTTCAT AAAGAGCACT GTGATCAGGT GCTGTCCTTG TTAAATCAGA AAACCGCAGA GGTCATTGAG GTAGAGAAGA CGGCCAAAAA GAGTTATTCG CCTCAACTAT ACGATCTAAC TGAATTGCAG CGGGACGCCA ATAAATTCTT TGGCTATTCG GCCCGGGAAA CCCTATCCAT TATGCAGCGC CTTTACGAGC ATTATAAGGT GCTGACCTAT CCGCGGACAG ATTCCCGCTA TCTTTCCTCG GATATGGTGG ATACGCTGGC AGAAAGACTC AAGGCCTGCA GTGATCAGCC CTATACCAAA TTGGCTTATA AGATTCTAAA AAACCCCATA AAACCCAGCA AGTCCTTTGT GGATGATAAC AAAGTGTCTG ATCATCATGC TATTATTCCC ACAGAACAGC CTGTGACGGT CAGCACCTTC AGTGATAAGG AAAGAAAAAT CTATGATTTA GTTGTAAGAC GTTTTTTAGC TGTTTTGTAT CCGCCCTTTG CCTATGAGCA AACCACCATC AAAGCAAAAA TGGGGGAAGA GCTTTTTATT GCCAGGGGTA AAGTGGTAAT TGCCCAGGGC TGGAAAGAAG TTTATCAGCA TGATTTAGAG GAAGAGGAGC CCAAGGATAG TCTTAGCGAA CAAACTTTAC CCGTTATCAA ACGAGGTGAT TGTTTAAAAG TACGCTCCCT AACCCAAACC AAGGGGGAGA CCAAACCACC GGAACCCTTT ACCGAGGGCA CATTGTTATC AGCCATGGAA AACCCCGCAA AATATATGTC CCAGGATAAT AAAGAGTTAA TCAAGACTCT AGACAAAACC GGAGGCCTGG GCACAGTGGC CACAAGGGCG GATATTATTG AAAAGTTGTT TAATAGCTTC CTGATCGAGA AGAAGGGAAA GCATATTGCC ATAACCTCCA AAGGAAAGCA ACTGTTGGAA CTGGTCCCAG AGGGGTTAAG GTCCCCGGCT TTAACTGCTC GCTGGGAAAA AGAGCTGGAG TTCATTGCAA AGGGTATACT AAATAAAAGC CAGTTTATCA ATGAGATAAA AAAATATGCC ACAACAGTGG TTCACGAGAT TAAAGAGAGT GAAAATAGAT TCCGGCACGA TAACTTAACC GGAACCAAAT GTCCGGAATG TGGCAAACGG ATGTTGGAAG TGAACGGAAA AAAAGGCAAG ATGCTGGTTT GTCAGGATCG GGAATGTGGC TATCGCAAAG GCCTTAGCAA AGTAACCAAT GCCCGGTGCC CCGAATGTCA CAAACGACTG GAATTGCATG GTGAAGGAGA AGGACAAATC TTTGTCTGTA AGTGTGGCTA TCGAGAGAAA CTCACGACCT TTCATGAAAG AAGAAAAAAT GAAAAGGGCA GTAACATTTC TAAAAAGGAT GTAAACAAGT ATCTGAGAAA TCAAGAGACA AAGGATGATT TTTTAAACAA TCCCCTTGCC GAAGCACTGG CTAAACTTAA GCTTAAATCA TAG
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Protein sequence | MHKSLVLAEK PSVARDIARV LNCYKKGNGY LEGDKYIVTW ALGHLVTLAD PEVYDEKYKS WRLEDLPMLP SPLKLVVIRQ SSKQFQIVRE QMNRKDLREI IIATDAGREG ELVARWIIEK ARVVKPLKRL WISSVTDKAI QDGFKKLRDG KEYQNLYAAA VARAEADWFV GINASRALTC KFNAQLSCGR VQTPTLAIIA KREEEIRNFR PKTFYGITVV TDQLKLTWQD RQSKDIKTFH KEHCDQVLSL LNQKTAEVIE VEKTAKKSYS PQLYDLTELQ RDANKFFGYS ARETLSIMQR LYEHYKVLTY PRTDSRYLSS DMVDTLAERL KACSDQPYTK LAYKILKNPI KPSKSFVDDN KVSDHHAIIP TEQPVTVSTF SDKERKIYDL VVRRFLAVLY PPFAYEQTTI KAKMGEELFI ARGKVVIAQG WKEVYQHDLE EEEPKDSLSE QTLPVIKRGD CLKVRSLTQT KGETKPPEPF TEGTLLSAME NPAKYMSQDN KELIKTLDKT GGLGTVATRA DIIEKLFNSF LIEKKGKHIA ITSKGKQLLE LVPEGLRSPA LTARWEKELE FIAKGILNKS QFINEIKKYA TTVVHEIKES ENRFRHDNLT GTKCPECGKR MLEVNGKKGK MLVCQDRECG YRKGLSKVTN ARCPECHKRL ELHGEGEGQI FVCKCGYREK LTTFHERRKN EKGSNISKKD VNKYLRNQET KDDFLNNPLA EALAKLKLKS
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