Gene Dred_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3222 
Symbol 
ID4957430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp3503477 
End bp3503962 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID640182410 
ProductybaK/ebsC protein 
Protein accessionYP_001114549 
Protein GI134301053 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA TAGCACAGGT AAAGACAAAT GCCATGCGTA TTCTAGATGG CAAAAAAATA 
GATTATGATG TTTATACCTA TGACAGTAAC GATGGTAAAA TTGACGGGGT TTCTGTGGCT 
GAGAAAGTTG GCAAGGATCC TCAGTCTGTT TATAAGACAC TGGTTGCCCA GGGGAATAGT 
AAGACCCTCT ATGTTTTTAT CGTACCAGTG GAAGAGGAAC TGGATTTAAA AAAGGCAGCC 
AAGGCCACTG GTGAGAAAAA AGTAGATATG ATTCCAGTCA AGGATATTCA AAAGCACACC 
GGGTATATCA GGGGTGGTTG CTCACCCCTG GGGATGAAAA AGCACTATAA AACCCTTATT 
GATGATAGTG CAAAGGGCTT AGAAAAAATT ATTGTCAGCG GGGGGAAAAT TGGCCTGCAG 
ATTGAGCTGG CTGTTGCAGA GTTAGCCTCG GTGACCGAAG CAGAAATAAT TGATATCACC 
AAATAA
 
Protein sequence
MRKIAQVKTN AMRILDGKKI DYDVYTYDSN DGKIDGVSVA EKVGKDPQSV YKTLVAQGNS 
KTLYVFIVPV EEELDLKKAA KATGEKKVDM IPVKDIQKHT GYIRGGCSPL GMKKHYKTLI 
DDSAKGLEKI IVSGGKIGLQ IELAVAELAS VTEAEIIDIT K