| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3213 |
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| Symbol | |
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| ID | 4957397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3493631 |
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| End bp | 3494608 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640182401 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001114540 |
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| Protein GI | 134301044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC GTATTATTGC ATTATTAGCA GCTGTTGCTA TGTTGACGGT TGTTATCACT
GGTTGCGGCG GTTCAACAGG AGAGCAAAAG ACCGGTGACA CTGCTGGAGA GAAAAAGTTC
TTTAATATTG CAACCGGGGG GACTGCAGGT GTATATTATC CCCTGGGTGG TGCCATTGCT
GAAATTATAA ACAAAAACAT CTCCGGAGCC AACGCCACTG CCCAGTCCAC AGGTGCGTCC
GTAGCTAACG TAAACATGTT AACTGAAGGT AATGTACAAA TTGCTTTTGT CCAAAATGAC
ATTGCTTACT ATGCCACCAA CGGTACTGAA ATGTTTAAGG ATAAAAAAGT GGATGGCCTG
AAATGCTTAG CTACCATTTA TCCTGAAACT GTTCAATTAG TTACTTTGGA AGGCAAAGGA
ATTAAGAGTG TTGCAGATCT GAAGGGTAAA AAGATTGCAG TTGGTGCTGC TGGAAGTAGT
GTTACCGGTA ACTCCCGCCA CGTATTAGAG GCCTACGGTC TAACCTTTGA AGATATCCAA
CCACAATACT TATCCTTTGC TGAAGCAGCC AACAGCCTAA AGGATGGTAA CATTGATGCT
GCCTTCCTAA CTGCCGGTGT ACCCACTGCA GCTGTTCAGG ATATTGCTGC CCAGCATAAA
GTAGTCATGG TACCCATCGA AGCCGATAAA ATTGACAGCA TGATTCAAAA ATATCCCTTC
TATACCAAGG TTGTGATACC TGCGGATGCT TATAAGCAAG GTGCAGATAT TGAAACGGTT
GGTGTTAAGG CGATGTTAGT GGCCACCGAC AAAATGGATG AGCAAACCGC CTATGATATT
ACCAAGGCAA TCTTTACCAA CTTGGATCAA TTAAAAGCGG CCCATGCTGT TGGCCAATAT
ATTTCTAAAG AAACTGCTAA GGACGGCGTA TCCATCCCCA TGCATGCCGG TGCAGAAAAA
TTCTTCAACG AGAAATAG
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| Protein sequence | MKKRIIALLA AVAMLTVVIT GCGGSTGEQK TGDTAGEKKF FNIATGGTAG VYYPLGGAIA
EIINKNISGA NATAQSTGAS VANVNMLTEG NVQIAFVQND IAYYATNGTE MFKDKKVDGL
KCLATIYPET VQLVTLEGKG IKSVADLKGK KIAVGAAGSS VTGNSRHVLE AYGLTFEDIQ
PQYLSFAEAA NSLKDGNIDA AFLTAGVPTA AVQDIAAQHK VVMVPIEADK IDSMIQKYPF
YTKVVIPADA YKQGADIETV GVKAMLVATD KMDEQTAYDI TKAIFTNLDQ LKAAHAVGQY
ISKETAKDGV SIPMHAGAEK FFNEK
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