Gene Dred_3186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3186 
Symbol 
ID4957273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3464950 
End bp3466014 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content48% 
IMG OID640182374 
Productsulfite reductase, dissimilatory-type beta subunit 
Protein accessionYP_001114513 
Protein GI134301017 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID[TIGR02066] sulfite reductase, dissimilatory-type beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00847169 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCACAAG CAAGAACTGA CATCGGACCG CCGCTCTATA AAGAAATGTT ACCGCCTATT 
ATCAAAGAAA ACTATGGTAA ATGGCAGTAC CATGAAATTG TAAAGCCTGG CGTGCTCGTA
CACGTATCTG AAACCGGAGC CAAGTTGTAC ACTGTACGTG CTGGTTCTCC GCGTTTGATT
AGTATCTACT TCATTCGCGA AATCTGTGAC TTGGCAGACA AATACTGTGA TGGTTACCTG
AGATTTACCA GCCGTCACAA CGTTGAATTC CTGTTATCCG ACGGAAGCAA AGTCGATGCC
CTGATCGCTG AGTTGACAGA GAAGGGTGTT CCCGTTGGTG GTACTGGTAA CTCCATTACC
AACATCGTAC ACACCCAGGG TTGGGTACAC TGCCACACCC CTGCCACTGA TGCATCTGGT
ATTGTTAAAT CCGTTATGGA TGAGCTGTTT GAATACTTCA CCACCATGAA ACTGCCTGCA
AAACTGAGAA TTTCTCTGGC TTGCTGTCTG AACATGTGCG GTGCTGTACA CTGCTCCGAC
ATCGCGATTT TAGGTATTCA CAGAACTGTT CCTAAGATCG ACCACGATAC ACTGCATAAG
GTTTGCGAAA TTCCGACTCT GACTGCTAGC TGCCCCACCG CAGCTATCCG TCCTAACCCC
AAGCTGAAAT CCGTCGAGAT TAAGGCTGAG CGTTGCATGT ACTGTGGTAA CTGCTACACC
ATGTGCCCAT CTGTTCATAT CATCGATGCT AAGAACGATG CTGTGTCCAT CTGGGTTGGT
GGCAAGATTT CCAACAGCCG TATTGGTCCC AGATTCTCTC GTCTGGCCAT TCCTTTCTTG
CCTAACAACC CCCCACGTTG GCCGGAAGTT GTTAACGCAG TTAAGCATAT CGTTGAGGTT
TATGCAGCAA ATGCACAACC TGGCGAGCGT ATGGCTGAGT GGATTGAACG CATTAGCTGG
GAGAAATTCT TCGAGGTTAC TGGTCTGCAA TTTACAGACA AGCACATCGA CGACTTCACT
CTGGCTCAAA CTACATTCAG AAGCACCACT CAGTTCAAGT GGTAG
 
Protein sequence
MAQARTDIGP PLYKEMLPPI IKENYGKWQY HEIVKPGVLV HVSETGAKLY TVRAGSPRLI 
SIYFIREICD LADKYCDGYL RFTSRHNVEF LLSDGSKVDA LIAELTEKGV PVGGTGNSIT
NIVHTQGWVH CHTPATDASG IVKSVMDELF EYFTTMKLPA KLRISLACCL NMCGAVHCSD
IAILGIHRTV PKIDHDTLHK VCEIPTLTAS CPTAAIRPNP KLKSVEIKAE RCMYCGNCYT
MCPSVHIIDA KNDAVSIWVG GKISNSRIGP RFSRLAIPFL PNNPPRWPEV VNAVKHIVEV
YAANAQPGER MAEWIERISW EKFFEVTGLQ FTDKHIDDFT LAQTTFRSTT QFKW