Gene Dred_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3178 
Symbol 
ID4957237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3457920 
End bp3458327 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content43% 
IMG OID640182366 
Productresponse regulator receiver protein 
Protein accessionYP_001114505 
Protein GI134301009 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00591737 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGTA CATCGTTTGA TATTCTTATA GTGGATGACC AGGTAGGAGT AAGACGATTA 
TTATTTGAGG CTCTGGCTGA CGAAGGTTAC ATTGTGAAAA TGGCCGGAAG CGGGGCTGAG
GCATTGCAAG TTCTTTCCCA GACTCTGCCT TCTCTAGTCC TACTGGATAT AAAGATGTCA
GGCATGACCG GCATTGAAAC TCTTCAGGAA ATTCGCAAAC ATTATGCACA ACTGCCTGTG
GCTATGATGA CAGCCTACGG AGATATGGAG ATTATGGATC AAACCAAAAG TTTAGGAGTC
CAACATTACC TAAATAAACC CTTTGATTTG GATGACGTTC GAGTTTTGGT ACGCTCAATT
TTATCACGTT CCGAAGGCTA CGGAAAGTTA CAAGCGGATA TTGGCTAA
 
Protein sequence
MNSTSFDILI VDDQVGVRRL LFEALADEGY IVKMAGSGAE ALQVLSQTLP SLVLLDIKMS 
GMTGIETLQE IRKHYAQLPV AMMTAYGDME IMDQTKSLGV QHYLNKPFDL DDVRVLVRSI
LSRSEGYGKL QADIG