| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3169 |
|---|
| Symbol | |
|---|
| ID | 4957217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3448305 |
|---|
| End bp | 3449174 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640182357 |
|---|
| Product | HemK family modification methylase |
|---|
| Protein accession | YP_001114496 |
|---|
| Protein GI | 134301000 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0174624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA GAGAAGCCCT GGTAAAGGGG CGGCAATATT TAAAAGAACA ACAAATTGAC
TCCTTTCAGT TGGACGCCCA AGTGCTGTTA TCGCAGGTTA CGGGCATTGA TCGGACTGGC
TTGTTTATGC GGCAGGAGCA ACCCCTAACC CCGCAACAAC AGGAAAAATA CCAAATATTA
CTGGAGCGTC GTGCCCAGGG GGAACCCGTG GCTTACCTGA TTGGGCGAAA AGAATTTATG
GGCAGGGATT TTGTGGTAAC CCCCGATGTT TTAATTCCCA GACCAGATAC AGAGCTAATG
GTGGAAACTG CTGTGAAGTT TTTTCACAAA AACTCTAGTT GTCCCCCGGT GGCTGTGGAC
GTAGGAACCG GCAGTGGTGC CATTGCCGTT AGCTTGGCCA GTCTGGTGCA GGAATTACAA
GTCTATGCCA TCGATCTTTC AGAAGCAGCC CTCAAAGTGG CCAGACAAAA TGCTGAACGG
CTAGGTATGA AAGAAAGGGT GCATTTTCAA CAGGGTAACC TATTGGAACC ACTGCTCAAA
ACAATGGGGG AAGAGGTCAG CATCATAACG GCAAATCTTC CCTATGTACC TAGCGGTGAC
ATACCCACCT TAATGAGAGA TGTAAAAGAA TTCGAACCCC ACTTGGCCCT AGATGGTGGG
CCCGATGGAT TGGACCTATA CCGTCTGCTG ATTCCCCAGG CTTACCGATT GCTGCAACCC
GGTGGGTTGC TGCTAATGGA AATTGGCCCG GGACAGGGCA CAGGTGCAAA AAAAATCTTG
CCAGCAGGGC AGTGGCAGGG TACTGTACTT AAGGACCTGG CCGGCCGCGA ACGCCTGGTG
CTGGCGGAGA AAAAAGGCGA ACATTTTTAA
|
|---|
| Protein sequence | MNIREALVKG RQYLKEQQID SFQLDAQVLL SQVTGIDRTG LFMRQEQPLT PQQQEKYQIL
LERRAQGEPV AYLIGRKEFM GRDFVVTPDV LIPRPDTELM VETAVKFFHK NSSCPPVAVD
VGTGSGAIAV SLASLVQELQ VYAIDLSEAA LKVARQNAER LGMKERVHFQ QGNLLEPLLK
TMGEEVSIIT ANLPYVPSGD IPTLMRDVKE FEPHLALDGG PDGLDLYRLL IPQAYRLLQP
GGLLLMEIGP GQGTGAKKIL PAGQWQGTVL KDLAGRERLV LAEKKGEHF
|
|---|
| |