Gene Dred_3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3165 
Symbol 
ID4957196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3443756 
End bp3444298 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content48% 
IMG OID640182353 
Producthypothetical protein 
Protein accessionYP_001114492 
Protein GI134300996 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000676254 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTTTAT TTACATTATT TGCCTTAGCG GTGGCCTTAG GAACAGATGC TTTCTCACTA 
TGTATTGGCA TTGGAATAGC TGGGGTTAAC CGTCGCCAAA TTGCCCTTAT AAGTTTAACC
GTGTTAATAT TTCATATCTT GATGCCCCTC CTAGGTTGGT ACGCCGGTGG TTTTCTGGGA
AGCAAAATGG GTCAGGCCGC ATCCATTGCC GGGGCGTTGC TGCTGCTGTA CCTTGGGGGC
AAAATGATTT GGGATACCAT AAAACCTGGG AAAGATGAGG GACCACGGTT CGTTATTACC
AACACAGGGG GGTTACTGCT TTTGTCAGCC AGTGTAAGTA TGGACGCCCT AAGTGTAGGG
TTTACCCTGG GAACCCAACA GGTATCCCTT GTTCTGGCAG CCGGTGTTAT CGGTCTCGTA
GCGGGGATGA TGACCTTTGC CGGCCTTACA CTGGGCAAAT ATGTCGGGGA CTGGATTGGT
GAAAGGGCCG AATTGGTGGG GGGTATTATT CTGGTGGGAA TCGGAGTAAA ATTATTTTTT
TAA
 
Protein sequence
MSLFTLFALA VALGTDAFSL CIGIGIAGVN RRQIALISLT VLIFHILMPL LGWYAGGFLG 
SKMGQAASIA GALLLLYLGG KMIWDTIKPG KDEGPRFVIT NTGGLLLLSA SVSMDALSVG
FTLGTQQVSL VLAAGVIGLV AGMMTFAGLT LGKYVGDWIG ERAELVGGII LVGIGVKLFF