Gene Dred_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3150 
Symbol 
ID4957145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3432134 
End bp3433552 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content51% 
IMG OID640182338 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_001114477 
Protein GI134300981 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTG GCCATATCGT CAGTGTTATT GGTGTGGTTG TGGACGTTGA GTTCGCACCT 
GGCCAGGTAC CTGATATATA TAGTGCGGTA AAAATCCGTA CTGAAGACCA GGAAGATAAA
TCCACCAAGT GGAATCTGAC CTTGGAAGTG GCCCAGCACC TTGGTAACAA CCGTGTTCGC
TGCATCGCCA TGTCCTCCAC CGAGGGTCTA AAGCGTGGTA TGAAAGTAGT TAGCACCGGT
AAAGCCATTT CAGTTCCTGT AGGTCGACCT GTTCTGGGCC GCCTGCTGAA CGTACTGGGC
GAAGAGGCTG ATGGTTTAGA ACCCATTAAA GCTGAAAAAT ACTATCCCAT TCACCGTCCG
GCTCCTGCTC TGGTAGACCA ATCCACCAAG GCAGAAATGC TGGAAACCGG TATCAAAGTT
ATCGACCTGA TGATCCCCTT CTTGAAGGGT GGTAAAATTG GTCTGTTCGG TGGTGCTGGT
GTAGGTAAGA CAGTTATCGT TATGGAGCTC ATTAACAACA TCGCTAAGCA GCACGGTGGT
ATCTCCGTGT TCGCCGGTGT AGGTGAGCGG ACCCGTGAAG GTAACGACCT TTACCATGAA
ATGAAAGAAG CAGGCGTATT AGAAAAGACC ATCATGGTGT TCGGTCAGAT GAACGAACCC
CCGGGAGCCC GTCTCCGTGT TGGCTTGACT GGTCTTACCA TGGCGGAATT CTTCCGTGAT
GAAGAAGGCG CTGACACTCT GCTCTTTATT GACAACATCT TCCGTTTCAC CCAGGCAGGT
TCCGAGGTTT CCGCTCTGCT GGGCCGTATG CCCTCCGCGG TAGGTTACCA GCCCACCCTG
GCCACTGAAA TGGGTCAATT ACAAGAACGT ATTACCTCCA CCCGTAAGGG TTCCGTTACC
TCGGTACAGG CCATTTACGT GCCTGCGGAC GACTTGACTG ACCCGGCTCC TGCGAACGCC
TTCGCTCACT TGGACGCCAC CGTTGTATTA AGCCGTGCCA TCTCCGAGCT GGGTATTTAT
CCTGCGGTTG ACCCGCTGGA TTCTACCTCC CGTATTCTGG ATCCCCAGGT AGTGGGTAAA
GAACACTATG AATGTGCCCG TGGCGTTCAG TCTGTACTGC AGCGTTATAA AGAATTACAA
GATATTATCG CTATTCTGGG TATGGATGAA CTGTCAGATG AAGATAAACT GACCGTGGCC
CGGGCCCGTA AGCTACAGCG TTTCCTGTCT CAGCCCTTCC ACGTGGCAGA AACCTTTACC
GGTCGTCCCG GTAAATATGT ATCCTTAAAA GATACAATCC GTAGCTTTAA TGAAATCCTC
GCCGGTAAAC ACGATGCCTT ACCGGAGCAG GCCTTCTACA TGGCCGGCGC CATTGAAGAA
GTTATGGAGA ACGCAAAACG TATTGAGGCT GGTGCATAA
 
Protein sequence
MNVGHIVSVI GVVVDVEFAP GQVPDIYSAV KIRTEDQEDK STKWNLTLEV AQHLGNNRVR 
CIAMSSTEGL KRGMKVVSTG KAISVPVGRP VLGRLLNVLG EEADGLEPIK AEKYYPIHRP
APALVDQSTK AEMLETGIKV IDLMIPFLKG GKIGLFGGAG VGKTVIVMEL INNIAKQHGG
ISVFAGVGER TREGNDLYHE MKEAGVLEKT IMVFGQMNEP PGARLRVGLT GLTMAEFFRD
EEGADTLLFI DNIFRFTQAG SEVSALLGRM PSAVGYQPTL ATEMGQLQER ITSTRKGSVT
SVQAIYVPAD DLTDPAPANA FAHLDATVVL SRAISELGIY PAVDPLDSTS RILDPQVVGK
EHYECARGVQ SVLQRYKELQ DIIAILGMDE LSDEDKLTVA RARKLQRFLS QPFHVAETFT
GRPGKYVSLK DTIRSFNEIL AGKHDALPEQ AFYMAGAIEE VMENAKRIEA GA