Gene Dred_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3149 
SymbolatpC 
ID4957135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3431733 
End bp3432131 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content51% 
IMG OID640182337 
ProductF0F1 ATP synthase subunit epsilon 
Protein accessionYP_001114476 
Protein GI134300980 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA CCCAACGCCT TGATATTGTC ACACCTGAAA AGGTAGTATT CAGTGAAGAA 
ATCGATTTTG TCGTGGCACC CGGCGCCGAT GGTGAACTCG GTATCTTACC TGAGCACGCA
CCCCTGGTAA CAGCCCTTAA GGTTGGTACA TTAAGGGTTC AGCAGGGTGG CAAATTCTTC
AAAGTGGCCG TCAGCGGTGG GTTCATGGAA GTCAAGAACA GCCGGATTGT TGTTCTGGCT
GACACCGCCG AGCGAGCCGA CCAAATTGAC GTCGAACGGG CCAAAGCAGC AAAACAGCGT
GCTGAACAGC GCCTGAACAG CAAGGGCTCC GAAATCGATG TTCACAGGGC AGAAATTGCT
CTGCACAAAG CAATCAACCG TATCAAAGCT GCTGAATAA
 
Protein sequence
MAKTQRLDIV TPEKVVFSEE IDFVVAPGAD GELGILPEHA PLVTALKVGT LRVQQGGKFF 
KVAVSGGFME VKNSRIVVLA DTAERADQID VERAKAAKQR AEQRLNSKGS EIDVHRAEIA
LHKAINRIKA AE