Gene Dred_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3114 
Symbol 
ID4956993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3390906 
End bp3392114 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content50% 
IMG OID640182302 
Productheat shock protein DnaJ domain-containing protein 
Protein accessionYP_001114441 
Protein GI134300945 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000358037 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAACCA AGAAGCGATC CAGTCGCAAG GGAGCCAAAC CGAAGGTGGA AAACTACTAC 
AAAATCCTTA ACACCCGCTC CAATGCCACT CAACAGACCA TTAAAGCAAA ATACATTGCC
CAGGTCAAGG CCTTCCCCCC AGAAACCCAC CCAGAAGAGT TTCAGCGTAT CCGCAGGGCT
TACGAGACCC TGCGGGACCC AGTTAAACGC AGGGAATATG ATATGCTGCG CAAGTACGGC
GGCAAAATTG AAAAGCTGAT GGAAAAAGCC TTCGAATTCA TGGGTGAAGA AAAGTGGGAC
AAAGCAGAGG AGTTATTCCG TCAAGCCTTG CAAATAGCAC CGGAGGATGC ACAGGTACAC
CTGGGGCTGG CCTACACAAC CTTTTGGCAG GGGGATGAGC GGACCTTTGA AGAAGAATTT
CAACGGGCCG TGGAACTGGC CCCTGTGGCG GAAGATAAAG TAATGCTTTT TACCATCAAG
GCCGGGTTGT TGCTTGATGA TGAGCGACCG GAAGAAGCCC TGCAAGTATT GCAAACCGTC
GAACAGCAGT ATCCCCAGCA TAGGCAGTTG TTCCACCAAC TTTCTGTTCG TGTCTATATT
GAATTGGGCC GTGAAGATGA GTTGTGGGCC ATGACCCGGG CGATGCTGCC GGCACCAGGC
GCAGAGAACC CAGAGGATAT TTATCTTTTT ATCCACTGGT TTAACACCAT GATTGATTTA
GAAAAGTGGC AGGAGTGGTC CAAGGTTCAG CAACGCCTAC GCCGGTTTTT AAAATCCCTA
GATGGGGCAG GCAAGTCCAT GGTACTGGAG GCTATACAAA ATGAGCATGA TAACTTTTAT
GAGGGGGGCT TTTTTCGCGG GGCTGAAATG CTGGTTGACT TGATGTACTA TCTGGATGGC
AAGAACCCCC AGGTCCAGGA GAGACGCCGC CAAACCAGGG AAATGGCGTG TTTGGAAAAG
GAACTTCTTC GTATCCGGGA TGATCAGAGT ATGTTTCCTT TAATCAGCGT CTACGCCTTT
GAGTGGTTTT ATGAGGATTA TTTGCCACCG GAAGAACTTT TCCTTTTACG GGAAAGTATC
CCCCCGATGC TGCTGGAGGC CATAGAAGGA ATGGACCATG AGTTTGCTGC GGGCATGGTG
AAACTACGCA AAAAATACCC CCTTATTTAC AAGCGTTTTC AAGACCGCTG GGATGATTTG
GGGGCCTAG
 
Protein sequence
METKKRSSRK GAKPKVENYY KILNTRSNAT QQTIKAKYIA QVKAFPPETH PEEFQRIRRA 
YETLRDPVKR REYDMLRKYG GKIEKLMEKA FEFMGEEKWD KAEELFRQAL QIAPEDAQVH
LGLAYTTFWQ GDERTFEEEF QRAVELAPVA EDKVMLFTIK AGLLLDDERP EEALQVLQTV
EQQYPQHRQL FHQLSVRVYI ELGREDELWA MTRAMLPAPG AENPEDIYLF IHWFNTMIDL
EKWQEWSKVQ QRLRRFLKSL DGAGKSMVLE AIQNEHDNFY EGGFFRGAEM LVDLMYYLDG
KNPQVQERRR QTREMACLEK ELLRIRDDQS MFPLISVYAF EWFYEDYLPP EELFLLRESI
PPMLLEAIEG MDHEFAAGMV KLRKKYPLIY KRFQDRWDDL GA