Gene Dred_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3102 
Symbol 
ID4956951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3375216 
End bp3376301 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content47% 
IMG OID640182290 
Productglycosyl transferase family protein 
Protein accessionYP_001114429 
Protein GI134300933 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.98419e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTAAATT CATTGCCCAT GGCTTTGTTG CTCGCCCTGG GGATTGCTAT TTTAATTACT 
CCAGGGGTTC GCAGGTTTGC CTTTAAAATT GGCGCCATTG ACAAACCGGA TCACCGTAAA
GTACACGCCA AAATCATGCC CCGTCTGGGT GGTCTGGCTG TGTTCCTGGC CTTTGCGGTT
ACGGTATTAC TTACTCAACA GTTAGATAAT AGAATAATTG GTTTATTAGT TGGCGGATTA
TTAATTGTAT TGCTGGGTAT CCTGGATGAT ACCAAGGGAC TGCCTGCCAA GGTTAAACTG
GTTGGACAAA TTGTGGCAGC CGCCGCAGTG ATTCCCTTTG GTGTTCAGGT TGAGTTCATT
ACCAACCCCC TTACAGGAAA TATGGTGCAA CTGGGCATAT GGGGCATACC CGTAACCATT
TTTTGGATCA TTTCTGTGAC CAATGCCGTT AACTTAATCG ATGGTCTGGA TGGATTAGCC
GGTGGCACAT CCTTTATTGC TGCCATTACA CTGGCCGCTG TTACCTGGCG GCAGGCTTCT
CTGCCGGGCG GGACGGGCAT GGAAGTGGTT GTCCTGGCCG TTATTCTGGC GGCTTCTATT
CTGGGCTTTT TACGGTACAA TTTTTTTCCT GCCAAAATAT TCCTAGGGGA TACCGGTTCC
ATGTTTCTGG GCTATGCCCT AAGTACCCTG GCGGTTATGG GTGTGGCCAA GGCTGCCACG
GCCATCTCTG TGATTGTACC CATGGTGATT ATGGGTATTC CTTTGCTGGA TGTATTTTTT
GCCATATTGC GTCGTTATCA AAGCCACCGA CCCATTTTTC AACCGGATAA AGAACATTTA
CATCACCGGA TGATGGCCTT GGGTTTATCC CATAAACAAA CGGTGTTGGC CATCTATGCC
ATAAACTTAC TGCTGGGCAT CAGTGCATTT CTTTTAACGG TTATCTCCAC CAGTCAGGCA
GTGTTGCTGC TCCTTATTAT TGCTGTGGTG ATTATCGTAG CGGCCAACAA AATTGGCATC
ATTGGCAAGG CCACCAAGAC AATTACAGTG TCTCAGAATT TACAACAGCG GTCCTCCAAA
ATGTAG
 
Protein sequence
MLNSLPMALL LALGIAILIT PGVRRFAFKI GAIDKPDHRK VHAKIMPRLG GLAVFLAFAV 
TVLLTQQLDN RIIGLLVGGL LIVLLGILDD TKGLPAKVKL VGQIVAAAAV IPFGVQVEFI
TNPLTGNMVQ LGIWGIPVTI FWIISVTNAV NLIDGLDGLA GGTSFIAAIT LAAVTWRQAS
LPGGTGMEVV VLAVILAASI LGFLRYNFFP AKIFLGDTGS MFLGYALSTL AVMGVAKAAT
AISVIVPMVI MGIPLLDVFF AILRRYQSHR PIFQPDKEHL HHRMMALGLS HKQTVLAIYA
INLLLGISAF LLTVISTSQA VLLLLIIAVV IIVAANKIGI IGKATKTITV SQNLQQRSSK
M