Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_3090 |
Symbol | |
ID | 4956903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 3354459 |
End bp | 3356303 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640182278 |
Product | putative Chase2 sensor protein |
Protein accession | YP_001114417 |
Protein GI | 134300921 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4252] Predicted transmembrane sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTTT CTCAAAGATT ATTACAGCTT GGTCTTAAGC ATAAGTTGTT AATTCCGATC ATCTTACTTA TTGTCATAGA ATTAGCTATA ACTATGGGTA TCTTCTCCCG TCCGGAAATG GATATTTATG ATGCCTGGTT TCGTTTTAAA GGGCGGCAAA ACCCTGGCAA TCAAATTGTC ATTGTGGCCA TTGATGAGTC CTCCATTAAT AGAATTGGCC CCCTGGCCTG GCCCAGGTCG GTGCACGCTG AGCTTCTGGA AAGGTTAAGG GAGGCCAAGG TGGTTGGTTT TGATATGGTG TTTGACTCAC TCAGTAATCC TGCTGAAGAC CAAGCCTTTG CCGAAGCAAT TAAGAAACAT GGCAGAGTGG TGCTGGCCAG TACCTTCTCT TTTATGAAAG ATGATACCGA CCAAGTAGAG CAAAGGCTGT TAACACCTCA GCAAAATTTC TTGTCAGCCG GTTTAGCCGG CTTAGGGTTT GCCAATACTC CCACCGATCC AGATCAGGTG GTAAGAAGAA TCACTCTGGT TGACATAAAC ACCTTCGATA TCCCCTTTCC TTCCTTTGGT CTGGCTGTGG CCCTGGTTGC CGAAGGCATT GACCCCCGAA ATATAACACT TTCTAAGGAT CATCTTCTGG TTGGTAAAAA AATGATACCC ATTGACAGTG CTAACCGAGC CCTAGCAAAT TTCTGGGGTC CCCGGGAAAC CTTTAAAACC ATTGGTTATG CCGATGTATT AGAGGGAAGA GTTCCCACCA GCTTTTTTAA AGATAAGATC GTTCTTATTG GAGATACCAC CGCCATGGGC CACGATGAGT TGTCAACACC TTATACCACA ACCAACATGG TATTAAGCGG TGCCTTGCCA ACCCCGGGTG TAGAGATCCA TGCCTCCGCG GTAAACAGTT TTATTTTGAA TGGTTGGTTC CGCCAAGTGC CCCCCTATGT TAATTTTATT TTTCTTGTCT TGGCGGGCTT AACAACTTCT ATTATGGTTT CCGGTGGTGG ACCTTGGAAG GGTTTAGTGG GCACCCTGTT TTTAGTTACC CTAAGTATGG GCATTGTCTT TGCCCTCTGG CAATCCCATT GGTGGTTGAA TTTGGCCGCC CCGGTTACCC TTATTTTTTT GACCTATGCT GTGACCACCG CTACGGAGTT TCTTCAAGCG GAAATGGCCC GTCGCAAAAC AAAGGCTATA TTCAGTCGGT ATCTTTCTCC CGATGTGGTG AATGAGTTAA TACAAAACAA CGATAGCCTT TCCCTGGGAG GTAAGCGCCA GGATCTTACC ATTATGTTCT GTGATATCCG AGGCTTTACA GCCTACAGTG AAGGTAAGCC TCCGGAAGAG GTTGTAAACC GATTAAATGA ATACCTGACA GCCATTACCC GAGTTGTTTT TAACCATGGA GGTATGCTGG ATAAGTACCT GGGTGATGGC TTGATGGCAA TTTTTGGGGC ACCCATTTTT TATGAGGATC ATATTGAGAG GGCTATCCTG GCTGCGGTGG AAATCCAAGA AGCCATTGAA ATGCTGAACC AGAAATGGGC CGAACAGGGT GCCCCGCCGT TAAATGTGGG GGTTGGCATC AATTCCGGCA GTGTCCTAGT CGGTAATGTG GGTAGTCCCG AACGCATGGA TTATACCGTC ATTGGTGAAG ATGTAAATCT AGCCTCCCGG GTGGAAGGGT TGACGAAAAA TTTTGGTGCT TTGATTGTTA TCAGTGAGCG TTCGGTGCAG CAACTGCCCG ATACCTGTGG ACTGAAATCA TCCTTGAGAT TTCTAGGCCA AGCTGAGGTG AAAGGTTTTA GTCACCCTGT GGGGGTCTAT ACCATTGAAA AGTAG
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Protein sequence | MNFSQRLLQL GLKHKLLIPI ILLIVIELAI TMGIFSRPEM DIYDAWFRFK GRQNPGNQIV IVAIDESSIN RIGPLAWPRS VHAELLERLR EAKVVGFDMV FDSLSNPAED QAFAEAIKKH GRVVLASTFS FMKDDTDQVE QRLLTPQQNF LSAGLAGLGF ANTPTDPDQV VRRITLVDIN TFDIPFPSFG LAVALVAEGI DPRNITLSKD HLLVGKKMIP IDSANRALAN FWGPRETFKT IGYADVLEGR VPTSFFKDKI VLIGDTTAMG HDELSTPYTT TNMVLSGALP TPGVEIHASA VNSFILNGWF RQVPPYVNFI FLVLAGLTTS IMVSGGGPWK GLVGTLFLVT LSMGIVFALW QSHWWLNLAA PVTLIFLTYA VTTATEFLQA EMARRKTKAI FSRYLSPDVV NELIQNNDSL SLGGKRQDLT IMFCDIRGFT AYSEGKPPEE VVNRLNEYLT AITRVVFNHG GMLDKYLGDG LMAIFGAPIF YEDHIERAIL AAVEIQEAIE MLNQKWAEQG APPLNVGVGI NSGSVLVGNV GSPERMDYTV IGEDVNLASR VEGLTKNFGA LIVISERSVQ QLPDTCGLKS SLRFLGQAEV KGFSHPVGVY TIEK
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