Gene Dred_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3063 
Symbol 
ID4956763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3324528 
End bp3325721 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content46% 
IMG OID640182251 
ProductABC-2 type transporter 
Protein accessionYP_001114390 
Protein GI134300894 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0378038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACAAG TTTTTAATAT TGCCTGTTAT GAAACCATGA TGATTTTTAA AGAACGTATT 
CTTTTTTTGC TGTTATTTAC CGTACCCTTG CTTTATGCCA CGGTCTTTGG TTTTGTCTAT
TTACAAGGGG TTATCAATCA TGTGCCCCTG GCGGTGGTGG ATCTGGATCA TTCAAAATTA
AGCCGGGAGG TTCGGTCCTC CTTTGCCAAC AGTCCCCATT TTGAGTTAAT TTCTAACATA
GAAAACTCTG CCCAAATGGA GCAGGCCATG CGGGAGGGGA AAATCCGAGC GGCTATTGTT
ATTCCAGAAA AGTTTGAGTT TGCTATGCAG AAGCACCAGC CCACTGAGTT ATTGGGGGTG
TATGATGCAT CCAATTTAAT TTGGGGCTAT AATACCCGGC GCTATATCCG GGAAGTAACC
ACGGATTTTA ATACTCAGCA GACGGCGGCT TACTTAGCCG GCCTGGGTAT TTCTGAGAAT
CAGGTAAAAA ACATTATGAA TACGGTGCAT TTAAACTATG AGGTTTGGTA TAATCCCACC
TTCAGCTATG CCACTTACTT TTATACCGGA CTGCTATTGA TGGTGATTCA CCAAATTTCC
CTCTTGAGTA TCAGCCTGAC GGTGACCCGG GAGAAGGAAC GGAATACCTG GGTTCAGTAT
CTTAGTTCTT GCCTGCCCAG TTGGAAAATA TTTGTGGGCA AGGCGCTGCC CTATTTTATC
GTCAATTTCT TTAATTATGC TTTGCTGCTC TGGGTTGCCG CCCATTTTGT CAATGCGAAA
ATAGGTGGCT CCATAGGTTT GGTGTTACTT TTTGGTTTGT TGTTCGATGT AATTATTACT
TCTCTGGGTT TTTATATCTC GGTACTGGCG CCCAATTCCC TGCAGGTAAC CCGCTACCTG
ATGCTGATTT CTGTACCCAT CTTTATGGCT TCGGGCTTAA CCTGGCCCCA GACCCATATC
CCCTTCGCCG TTAATGCCCT GGCCTCTTTG ATGCCCTTTA CCTGGATGGC CGAGGCCTTT
CGTTTAATCA CGGTGAAGAA TTTGCCCCTG GCTTATTTGT TGAATCACCT ATTGGTGCTG
TTGGCCATGG CCGGGGTGAG CCTGGGTCTG GCCATGAATT TCAAGAAGAG CCGCCGTCCA
CCCTCCAGCA GCGGCTTGGT GGTAAATAGC GGTACCAACT ATCCTGGACT ATAG
 
Protein sequence
MKQVFNIACY ETMMIFKERI LFLLLFTVPL LYATVFGFVY LQGVINHVPL AVVDLDHSKL 
SREVRSSFAN SPHFELISNI ENSAQMEQAM REGKIRAAIV IPEKFEFAMQ KHQPTELLGV
YDASNLIWGY NTRRYIREVT TDFNTQQTAA YLAGLGISEN QVKNIMNTVH LNYEVWYNPT
FSYATYFYTG LLLMVIHQIS LLSISLTVTR EKERNTWVQY LSSCLPSWKI FVGKALPYFI
VNFFNYALLL WVAAHFVNAK IGGSIGLVLL FGLLFDVIIT SLGFYISVLA PNSLQVTRYL
MLISVPIFMA SGLTWPQTHI PFAVNALASL MPFTWMAEAF RLITVKNLPL AYLLNHLLVL
LAMAGVSLGL AMNFKKSRRP PSSSGLVVNS GTNYPGL