Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_3063 |
Symbol | |
ID | 4956763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 3324528 |
End bp | 3325721 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640182251 |
Product | ABC-2 type transporter |
Protein accession | YP_001114390 |
Protein GI | 134300894 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0378038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACAAG TTTTTAATAT TGCCTGTTAT GAAACCATGA TGATTTTTAA AGAACGTATT CTTTTTTTGC TGTTATTTAC CGTACCCTTG CTTTATGCCA CGGTCTTTGG TTTTGTCTAT TTACAAGGGG TTATCAATCA TGTGCCCCTG GCGGTGGTGG ATCTGGATCA TTCAAAATTA AGCCGGGAGG TTCGGTCCTC CTTTGCCAAC AGTCCCCATT TTGAGTTAAT TTCTAACATA GAAAACTCTG CCCAAATGGA GCAGGCCATG CGGGAGGGGA AAATCCGAGC GGCTATTGTT ATTCCAGAAA AGTTTGAGTT TGCTATGCAG AAGCACCAGC CCACTGAGTT ATTGGGGGTG TATGATGCAT CCAATTTAAT TTGGGGCTAT AATACCCGGC GCTATATCCG GGAAGTAACC ACGGATTTTA ATACTCAGCA GACGGCGGCT TACTTAGCCG GCCTGGGTAT TTCTGAGAAT CAGGTAAAAA ACATTATGAA TACGGTGCAT TTAAACTATG AGGTTTGGTA TAATCCCACC TTCAGCTATG CCACTTACTT TTATACCGGA CTGCTATTGA TGGTGATTCA CCAAATTTCC CTCTTGAGTA TCAGCCTGAC GGTGACCCGG GAGAAGGAAC GGAATACCTG GGTTCAGTAT CTTAGTTCTT GCCTGCCCAG TTGGAAAATA TTTGTGGGCA AGGCGCTGCC CTATTTTATC GTCAATTTCT TTAATTATGC TTTGCTGCTC TGGGTTGCCG CCCATTTTGT CAATGCGAAA ATAGGTGGCT CCATAGGTTT GGTGTTACTT TTTGGTTTGT TGTTCGATGT AATTATTACT TCTCTGGGTT TTTATATCTC GGTACTGGCG CCCAATTCCC TGCAGGTAAC CCGCTACCTG ATGCTGATTT CTGTACCCAT CTTTATGGCT TCGGGCTTAA CCTGGCCCCA GACCCATATC CCCTTCGCCG TTAATGCCCT GGCCTCTTTG ATGCCCTTTA CCTGGATGGC CGAGGCCTTT CGTTTAATCA CGGTGAAGAA TTTGCCCCTG GCTTATTTGT TGAATCACCT ATTGGTGCTG TTGGCCATGG CCGGGGTGAG CCTGGGTCTG GCCATGAATT TCAAGAAGAG CCGCCGTCCA CCCTCCAGCA GCGGCTTGGT GGTAAATAGC GGTACCAACT ATCCTGGACT ATAG
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Protein sequence | MKQVFNIACY ETMMIFKERI LFLLLFTVPL LYATVFGFVY LQGVINHVPL AVVDLDHSKL SREVRSSFAN SPHFELISNI ENSAQMEQAM REGKIRAAIV IPEKFEFAMQ KHQPTELLGV YDASNLIWGY NTRRYIREVT TDFNTQQTAA YLAGLGISEN QVKNIMNTVH LNYEVWYNPT FSYATYFYTG LLLMVIHQIS LLSISLTVTR EKERNTWVQY LSSCLPSWKI FVGKALPYFI VNFFNYALLL WVAAHFVNAK IGGSIGLVLL FGLLFDVIIT SLGFYISVLA PNSLQVTRYL MLISVPIFMA SGLTWPQTHI PFAVNALASL MPFTWMAEAF RLITVKNLPL AYLLNHLLVL LAMAGVSLGL AMNFKKSRRP PSSSGLVVNS GTNYPGL
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