Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_3047 |
Symbol | |
ID | 4956742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 3307306 |
End bp | 3308037 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640182235 |
Product | sugar transferase |
Protein accession | YP_001114374 |
Protein GI | 134300878 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACTG AGGTCAGATC AAGTATAAAC AACCCTGTTC AGCACATTGA TGATGGCGGG GTGTACAGGA GATACATAAA AAGGCCAATG GATTTTATCC TGTGTTTATG CGCAATTATT GTGTTAGCAC CTGTTCTGTT GGTAACTGCT GTACTTGTAA GAGTCAAACT AGGCAGTCCG GTGATATTTA AACAGAAACG CCCTGGCTTA AATGAGAAGA TATTTACTCT TTATAAATTC AGAACGATGA CGGATGAGAC AGATGAGAAT GGAGAGTTGC TTCCAGACTC AGTGAGGCTA AATAAGTTTG GCAGGTTGTT GCGGTCCACA AGCTTGGATG AACTGCCAGA GCTGTTCAAT ATACTCAAAG GGGATATGAG TATTGTGGGG CCGAGGCCAC TGCTTGTAAG AGATATGGTG TTTATGACTC CTGAGCAAAG ACAGCGACAT AGTTTGCTGC CTGGACTTAC AGGATGGGCA CAAGTTAATG GTAGGAATAA TGTGGCCTGG GAAGAAAAAC TTTCATTAGA TTTGGAGTAT ATTAATGACA TTTCATTTGT TAGGGACTGG AAGATTATTT TTCAAACCGT AGCAAAGGTG TTTAAAAAGG AGGATATAAG CACTGAAGGT ATGGATACAG CAGAGGACTT TGGTGATTAT TTGTTGAGAA CTGGTAAGAT TCCCAGAAAT GAGTATAAGA GATTAATAGA AAAAAGTAAA TTGCTATTGT AA
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Protein sequence | MQTEVRSSIN NPVQHIDDGG VYRRYIKRPM DFILCLCAII VLAPVLLVTA VLVRVKLGSP VIFKQKRPGL NEKIFTLYKF RTMTDETDEN GELLPDSVRL NKFGRLLRST SLDELPELFN ILKGDMSIVG PRPLLVRDMV FMTPEQRQRH SLLPGLTGWA QVNGRNNVAW EEKLSLDLEY INDISFVRDW KIIFQTVAKV FKKEDISTEG MDTAEDFGDY LLRTGKIPRN EYKRLIEKSK LLL
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