Gene Dred_3047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3047 
Symbol 
ID4956742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3307306 
End bp3308037 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content40% 
IMG OID640182235 
Productsugar transferase 
Protein accessionYP_001114374 
Protein GI134300878 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACTG AGGTCAGATC AAGTATAAAC AACCCTGTTC AGCACATTGA TGATGGCGGG 
GTGTACAGGA GATACATAAA AAGGCCAATG GATTTTATCC TGTGTTTATG CGCAATTATT
GTGTTAGCAC CTGTTCTGTT GGTAACTGCT GTACTTGTAA GAGTCAAACT AGGCAGTCCG
GTGATATTTA AACAGAAACG CCCTGGCTTA AATGAGAAGA TATTTACTCT TTATAAATTC
AGAACGATGA CGGATGAGAC AGATGAGAAT GGAGAGTTGC TTCCAGACTC AGTGAGGCTA
AATAAGTTTG GCAGGTTGTT GCGGTCCACA AGCTTGGATG AACTGCCAGA GCTGTTCAAT
ATACTCAAAG GGGATATGAG TATTGTGGGG CCGAGGCCAC TGCTTGTAAG AGATATGGTG
TTTATGACTC CTGAGCAAAG ACAGCGACAT AGTTTGCTGC CTGGACTTAC AGGATGGGCA
CAAGTTAATG GTAGGAATAA TGTGGCCTGG GAAGAAAAAC TTTCATTAGA TTTGGAGTAT
ATTAATGACA TTTCATTTGT TAGGGACTGG AAGATTATTT TTCAAACCGT AGCAAAGGTG
TTTAAAAAGG AGGATATAAG CACTGAAGGT ATGGATACAG CAGAGGACTT TGGTGATTAT
TTGTTGAGAA CTGGTAAGAT TCCCAGAAAT GAGTATAAGA GATTAATAGA AAAAAGTAAA
TTGCTATTGT AA
 
Protein sequence
MQTEVRSSIN NPVQHIDDGG VYRRYIKRPM DFILCLCAII VLAPVLLVTA VLVRVKLGSP 
VIFKQKRPGL NEKIFTLYKF RTMTDETDEN GELLPDSVRL NKFGRLLRST SLDELPELFN
ILKGDMSIVG PRPLLVRDMV FMTPEQRQRH SLLPGLTGWA QVNGRNNVAW EEKLSLDLEY
INDISFVRDW KIIFQTVAKV FKKEDISTEG MDTAEDFGDY LLRTGKIPRN EYKRLIEKSK
LLL