| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2990 |
|---|
| Symbol | |
|---|
| ID | 4956492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3249455 |
|---|
| End bp | 3250636 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640182179 |
|---|
| Product | phosphoglycerate kinase |
|---|
| Protein accession | YP_001114318 |
|---|
| Protein GI | 134300822 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGA AGTCCGTTAG GGACGTCGAC GTAAAGGGTA AAAGGGTCTT TGTCCGGGTG
GACTTTAATG TACCCTTGGA CAGAGAGAAA ATTACCGACG ATACTCGTAT TCAAAAGGCT
TTACCCACCA TCCAATATTT AATGGGTCAG GGAGCCAGGG TAATTTTGGC CTCCCACCTG
GGTCGACCCA AGGGAGAAGT GGTGGAGAAA TACCGCCTGA ATCCCGTTGC CAAACGGCTT
TCTGAACTTC TGGGCCAGGA AGTTGTCAAG GTTAATGAAT CTGTAGGAAC CGAACCCCAA
CAGGCCATTG CCCAGATGAA GGACGGCGAT GTACTGCTGC TGGAGAATGT TCGTTTCCAC
GGAGAAGAGA CTAAAAATGA TGAGAAGTAT GCCAGACAAT TGGCTCAACT GGCAGATCTT
TTTGTCAATG ATGCCTTTGG TGCTGCCCAC AGGGCCCATG CTTCCACCGC AGGTATTGCT
GAGTACCTGC CTGCTGTGGC TGGCTTTCTG ATGGAAAAGG AATTAGAAAA TCTCGGCAAG
GCGGTTACCA ATCCTGAACG TCCCTTTGTG GCCATCATTG GTGGAGCTAA GGTTTCCGAT
AAGATTGGGG TCATTGAGAA CCTGTTAAGC AAGGTGGACA CCTTGATCAT TGGCGGCGGT
ATGGCTAATA CCTTCCTCAA GGCCCAAGGT TACGATATTG GCAAATCCCT CATTGAACCG
GATAAGGTTG AGCTGGCCAA GGAATTGCTG GAACGGTCTA AGGCTCAGAA GGTGGAATTG
TTACTACCCA ATGATGCTGT GGTGGCCCTG GCCATGGAAC CAAATGCCCA ACAAGGGGTG
GTTCCAGTTA GCGGGGTGCC GGCTGATTGG ATGATTTTGG ACATTGGACC GGACACTGCA
GAGTGTTATG CAGCCGCTGC TAAAAAAGCT GCCACCGTGG TTTGGAACGG ACCCATGGGT
GTCTTTGAAA TGGATGCCTT TGCCAAAGGT ACCGAGGCTG TGGCCAAGGC CTTGGCAGAG
TCCAATGCCA TCACCATTGT GGGCGGTGGC GACTCCGTAG CGGCGGTGAA CAAGGTGGGT
GTGGCGGATC GGATCAGTCA TATTTCCACC GGCGGTGGTG CTTCGCTGGA ATTCTTAGAA
GGCAAAGTAC TGCCAGGTGT GGCTGCCCTG CAGGATAAAT AG
|
|---|
| Protein sequence | MQKKSVRDVD VKGKRVFVRV DFNVPLDREK ITDDTRIQKA LPTIQYLMGQ GARVILASHL
GRPKGEVVEK YRLNPVAKRL SELLGQEVVK VNESVGTEPQ QAIAQMKDGD VLLLENVRFH
GEETKNDEKY ARQLAQLADL FVNDAFGAAH RAHASTAGIA EYLPAVAGFL MEKELENLGK
AVTNPERPFV AIIGGAKVSD KIGVIENLLS KVDTLIIGGG MANTFLKAQG YDIGKSLIEP
DKVELAKELL ERSKAQKVEL LLPNDAVVAL AMEPNAQQGV VPVSGVPADW MILDIGPDTA
ECYAAAAKKA ATVVWNGPMG VFEMDAFAKG TEAVAKALAE SNAITIVGGG DSVAAVNKVG
VADRISHIST GGGASLEFLE GKVLPGVAAL QDK
|
|---|
| |