Gene Dred_2985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2985 
SymbolhppA 
ID4956484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3242942 
End bp3245044 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content49% 
IMG OID640182174 
Productmembrane-bound proton-translocating pyrophosphatase 
Protein accessionYP_001114313 
Protein GI134300817 
COG category[C] Energy production and conversion 
COG ID[COG3808] Inorganic pyrophosphatase 
TIGRFAM ID[TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000074507 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAATA TGACACTTGC TTATTACGCT GCGGGTGCAG GTGCGCTGGC TCTATTATTT 
GCCTTATTTA CTCTGTCCAG CATCCTCAAA GAAGATATGG GTACACCCAA AATGCGTGAG
ATTTCCGAAG CTATTCACGA AGGTGCAATG GCTTTCCTAA ATCGTCAGTA CAAAACATTG
ATTCCTTTTG CTCTTATCAT TTTCGTTCTT CTATGGGCTG CTCAGTATTT TGTAGAAGGT
GGCGGCAGTG CACACATGCC TGTAGGCCCC GCTTCTGCGA TCTCCTTCTT AGTTGGTGCG
GCTTTGTCTG CTGTAGCTGG TTACATCGGT ATGACCTCCA CCACCAAATC TAACGCTCGT
ACCGCTGAAG CTGCTCGCAG CCACGGTCTG TCTAAAGCTC TAAACGTATC CTTCCGTGCT
GGTGCTGTTA TGGGTTTGTC CGTTGCTGGT CTTGGTCTGC TGGGCGTTTC CGTACTGTAC
ATCATCTTTG GTCAACCTAC CATTATTAAC TCCTTTGCAT TTGGTGCTTC TGCCATCGCG
TTCTTTGCTC GTATTGGTGG CGGTATCTAC ACCAAAGCTG CTGACGTAGG TGCTGACCTT
GTAGGTAAAG TAGAAGCTGG TATTCCTGAA GATGATCCAC GTAACCCTGC CGTTATCGCT
GATAACGTAG GTGACAACGT TGGTGATACC GCTGGTATGG GTGCTGACTT ATTCGAATCC
TATGCTGCTA CCACCATCGC TGCTATGCTG ATTGGTAACA CCCTGTTTGG TTTTGCTGGC
ATTATCTTCC CAATGTTAGT AGGTGCTGTT GGTATTGTCG CTGCTATTAT CGGTACCTTC
TGTGTACGTA CCTCCGAAGA TGGTAACCCC CAGGCTGCTT TGAACGTAGG TCTCTGGGTA
ACCAACATCT TAACCGCTAT TGGCGTTTTC TTTGTAGCAA AAGCTACCTT CGTTGGTGAA
GCTGCTTCTG TTGCTACTGG TATTTTCATG GCTGTTGTAG CCGGTTTGAT TGTTAACGTA
GCCGTTGGTT ACTTAACTGA AGTGTACACT GGTACTGGCA AGGCTTCCGT TAACCGTATT
GCTGAAGCAT CCAAGTCTGG CCCTGCTACC AACGTTATCC ACGGTCTGGC TGTTGGTATG
GAATCTACCT TCCTGCCCAT GCTGACCTTT GCTGGTGCTA TTTACTTCTC CTTCTGGGCA
GTAGGATCCG CTGCTCCTGC TGACAAAGCT GAAATATGGG CTATCTATGG TATTGCTATG
GCTGCTATGG GTATGCTTTC CTCCGCTGGT TTCGTTGTTG CTATGGACTC CTTCGGTCCT
GTTGCTGACA ACGCTGGTGG TATCGCTGAA ATGGCTGAAC TTCCTCCCGA AGTTCGTGCT
AAGACTGACA AACTGGATGC AGTTGGTAAC ACAACCGCTG CTATCGCTAA AGGTTTCGCC
ATTGGTTCCG CTGCTCTGAC CGCTCTGGCT CTGTTCAGTG CATACGTTGA AGCAGTAACT
CACAAGTTTG CTGCTGTACT GCCCGGTGGC AAGTTCATCG TTAACTTGAC TGAACCCATG
GTTCTGGTTG GTGTGTTTAT CGGTGGTTCC ATTCCTTTCT TAGTAGGTGC TCAAACCATG
CGTGCCGTTG GTGAGGCTGC TTACGGAATG GTTGAAGAAG TTCGCCGTCA GTTCCGTGAA
ATCCCTGGTC TGCTGGAAGG CAAGCCTGGT GTAAAAGCTG ACTATGCTCG TTGCGTAGAC
ATTGCTACTT CTTCTGCTAT CTCCAAGATG GTTGCCCCTG GTATGGTAGC TGTATCTGCT
CCCATACTGG TTGGTTTCAT CCTTGGTGCA AAAGCTCTGG CTGGTTTCTT AGGTGGCTTA
ACCGTTACTG GTGTTCTGAT GGCTCTGTTC CTGTCTAACG CTGGTGGTGC TTGGGACAAC
GCTAAGAAAT GGATCGAGCA AGGCAACTTG GGTGGTAAGA AGTCTGATCC ACACAAAGCA
GCCGTTGTTG GTGACACTGT AGGTGACCCC TGCAAAGATA CCTCCGGTCC TGCTATGAAC
CCCCTGATCA AGGTTGCTGG TACTATCTCC CTGATCCTTG GTCCCCTTCT TACCAGACTG
TAA
 
Protein sequence
MENMTLAYYA AGAGALALLF ALFTLSSILK EDMGTPKMRE ISEAIHEGAM AFLNRQYKTL 
IPFALIIFVL LWAAQYFVEG GGSAHMPVGP ASAISFLVGA ALSAVAGYIG MTSTTKSNAR
TAEAARSHGL SKALNVSFRA GAVMGLSVAG LGLLGVSVLY IIFGQPTIIN SFAFGASAIA
FFARIGGGIY TKAADVGADL VGKVEAGIPE DDPRNPAVIA DNVGDNVGDT AGMGADLFES
YAATTIAAML IGNTLFGFAG IIFPMLVGAV GIVAAIIGTF CVRTSEDGNP QAALNVGLWV
TNILTAIGVF FVAKATFVGE AASVATGIFM AVVAGLIVNV AVGYLTEVYT GTGKASVNRI
AEASKSGPAT NVIHGLAVGM ESTFLPMLTF AGAIYFSFWA VGSAAPADKA EIWAIYGIAM
AAMGMLSSAG FVVAMDSFGP VADNAGGIAE MAELPPEVRA KTDKLDAVGN TTAAIAKGFA
IGSAALTALA LFSAYVEAVT HKFAAVLPGG KFIVNLTEPM VLVGVFIGGS IPFLVGAQTM
RAVGEAAYGM VEEVRRQFRE IPGLLEGKPG VKADYARCVD IATSSAISKM VAPGMVAVSA
PILVGFILGA KALAGFLGGL TVTGVLMALF LSNAGGAWDN AKKWIEQGNL GGKKSDPHKA
AVVGDTVGDP CKDTSGPAMN PLIKVAGTIS LILGPLLTRL