Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2943 |
Symbol | |
ID | 4956227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 3187448 |
End bp | 3188017 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640182128 |
Product | HPP family protein+B94 |
Protein accession | YP_001114271 |
Protein GI | 134300775 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00825304 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAAAA ATCTACATCC AGCTGAATTG ACTAATTACC CGTCAAACTT GGAGATAGTT ATGTCTTATT TAAAGAAAAT GCGAGGAGGT AACTGTCCTA CCTTTCAAGC TGTTGACATA AGAAGCCACT TAATTACTGC TGTAGGGAGC TTTTTAGGTA TTGGGTTAAT CGCACTTTTA AATACCTTTT ATGATATTCC ACTACTTGTA CCTTCCCTTG GCGCATCCGC TGTGCTCTTA TACTCTGCCT GCCACGTTCC CATGGCCCAA CCAAGAAACG TCATTGGTGG TCATTTGGTC TCTGCCATGG CAGGGGTTGT GGTTTATCAG TGGCTGGGTA ATCAGTGGTG GACCATTGCC TTGGCGGTAA CATTGGCCAT CTTTCTTATG AATTTGACCC ACACCTTGCA CCCACCGGGT GGCGCAACAG CCTTTGTGGC TGTATATACC TCCCAAAGTT TCACTTATAT TTTTTCTCCC GTGTTGCTTG GTGCAACACT ATTGGTTATC ATTGCAGTTC TCGTAAATAA TTTTTCCCAT AAGCGGCATT ACCCTAATTT TTGGTTCTAG
|
Protein sequence | MAKNLHPAEL TNYPSNLEIV MSYLKKMRGG NCPTFQAVDI RSHLITAVGS FLGIGLIALL NTFYDIPLLV PSLGASAVLL YSACHVPMAQ PRNVIGGHLV SAMAGVVVYQ WLGNQWWTIA LAVTLAIFLM NLTHTLHPPG GATAFVAVYT SQSFTYIFSP VLLGATLLVI IAVLVNNFSH KRHYPNFWF
|
| |