| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2900 |
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| Symbol | |
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| ID | 4957863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3143329 |
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| End bp | 3143976 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640182081 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001114229 |
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| Protein GI | 134300733 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.28632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATCCCGT TAAAGGACAA TATTCCTTCG AGAAGATTTC CCCTTGTTAC GATAATCCTG
ATTTTGCTGA ATACCTTTGC CTGGTTGTAT GAGCAATCTC TCGGTCCTTA TATGGATAAT
CTGATCTTTG CCCTGGGTGT TACGCCGGCT GAAATATTCA AATATGGATT GCTTGGTCAG
TTTTTCTTCA TGACTACGGC CATGTTTTTA CACGGTAGTT GGATGCATTT CCTGGGTAAT
ATGTTGTACC TGTGGATCTT TGGGGACAAT GTTGAAGACC GTATGGGTAA GTTGCGATTT
TTATTGTTTT ATTTGATTAC TGGTTATTCC GCAACCCTGG CCCACGTTTT CTCAGATCCT
ACCTCCACTT CGCCGTTGAT TGGTGCCAGT GGCGCCATTG CTGGTGTATT GGGTGGGTAC
TTTGTTTTAT TCCCCCACGC CAGAGTACTT ACTCTTATCC CCATTTTTGT TTTTATCCAG
ATCATTCATA TACCGGCCCT TTATTTTTTA GGTTTTTGGT TTCTGTTACA GGTTGTTAAC
CAAACTTTTA GTATTCAGGG AGCACAATCA GTGGCTTTTC TGGCTCATAT CGGCGGTTTT
GCAGCGGGCG CCCTCCTGGT AAAATTCTTT CAAAAATATC GCTATTAA
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| Protein sequence | MIPLKDNIPS RRFPLVTIIL ILLNTFAWLY EQSLGPYMDN LIFALGVTPA EIFKYGLLGQ
FFFMTTAMFL HGSWMHFLGN MLYLWIFGDN VEDRMGKLRF LLFYLITGYS ATLAHVFSDP
TSTSPLIGAS GAIAGVLGGY FVLFPHARVL TLIPIFVFIQ IIHIPALYFL GFWFLLQVVN
QTFSIQGAQS VAFLAHIGGF AAGALLVKFF QKYRY
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