Gene Dred_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2893 
Symbol 
ID4957286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3139814 
End bp3140515 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content45% 
IMG OID640182074 
Productpeptidase C26 
Protein accessionYP_001114222 
Protein GI134300726 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.220365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCCA TTATTGGTAT TACCAGTTCC TATGATGATA AAACCGGCAG AACTTTTTTG 
AGCCGCGATT ATATACAGGC TGTGACAGCT GCCGGAGGTT TGCCCTTAGT TTTGCCTTGT
ATCCTACCAG AAAGCTCGGT TCCTTTCCTG TTAGAGTTGG TTGATGGACT CATTTTGTCC
GGTGGTGTTG ATGTTGACCC TCTTATATTC GGGGAAGAAC CACACCCCCA GATGGGAGAA
ATATGTCCCG AAAGGGATAA ATTTGAGTTC ACCTTAACCA AGCAGGCCCT CGGGCAGGAT
TTGCCAATAC TGGCCATTTG TCGCGGCGTT CAGATGCTCA ATATTGTTGC CGGAGGCAGT
ATACTTCAAG ATATTGGAGC CACGGTTCAA TGTCCTGTAA AGCATAGCCA GGAAGCACCT
AGGTGGTATG GTACACACAC CATCAACATT TTGCCAGAAA GTCGGTTAGC AAAGATTTGG
GGCAAAAAAA TGGTTGTTAA TTCCTATCAT CACCAGGCTG TGGGAACAGT GGGGAAAGGT
TTTATTGTCA GTGCCTGGTC TGTGGACGGT GTTGTGGAGG GAATGGAGAG TACAACCCAT
TCCTTTGTTC TGGGAGTACA GTGTCATCCG GAATGCATGT GGGAAAAAGA CACGGTTATT
TTCCAGTTAT TTAGAGAGTT TGTTCAAGCT GCAAAAAAAT AA
 
Protein sequence
MIPIIGITSS YDDKTGRTFL SRDYIQAVTA AGGLPLVLPC ILPESSVPFL LELVDGLILS 
GGVDVDPLIF GEEPHPQMGE ICPERDKFEF TLTKQALGQD LPILAICRGV QMLNIVAGGS
ILQDIGATVQ CPVKHSQEAP RWYGTHTINI LPESRLAKIW GKKMVVNSYH HQAVGTVGKG
FIVSAWSVDG VVEGMESTTH SFVLGVQCHP ECMWEKDTVI FQLFREFVQA AKK