Gene Dred_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2889 
Symbol 
ID4956681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp3135403 
End bp3136407 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content48% 
IMG OID640182070 
Productthiamine-monophosphate kinase 
Protein accessionYP_001114218 
Protein GI134300722 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000202219 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGAGAC TGGCAAAGCT TGGTGAATTT GGCTTAATTG ATCTATTAAA CAAGAATATG 
CTTTATGACC CGGAGAAGGT TATTGCAGGA ATCGGTGATG ATGCAGCAGT TTTAAAACCC 
CCCGGAACAA AATGGCAGTT ATTGACAACA GATATGATGA TGGAAAATAT TCACTTTCGT 
TTGGATTGGT CTCAATATTA TCAAGTGGGT TATAAGGCCT TGGCTGTCAA TATTAGTGAT 
GTGGCTGCCA TGGGGGGGTA TCCCAGCCAT GCCGTGGTCT CCGTAGGAAT CCCCGAGGAG 
ACCCGGGTAG AAGATATAGA AGAACTCTAC CGGGGCCTAA AGGAGATGGC TTGCCGGTTT 
AAGGTTAATC TAGTGGGAGG CGATACCGTA AAGTCACCGG GGCCGCTGGT GATTAACATT 
GCCCTGATGG GTGAAGTGGA AGAGGGTCGG GCGGTATTTC GCTCGGGAGC CAAGCCCGGG 
GATTTGATTT ATACAACTGG TTTTCTAGGG ACTTCCGCAG CGGGGCTTTA CATCCTAAGT 
CATAATGGTG ACTATCCTGT TGAGTTGAAG GAAAAAGTAA TTCGGTCCCA TCTGCTGCCG 
GAACCCCGGG TGGCCGCAGC AAGAATATTA AGTGAGTTGG AGGGTGTCAC AGCCCTTGAT 
GACAATAGCG ATGGGTTGGC TGCGGAATTA AGGGAAATCT GCCGGGCAAG TTCCGCCGGC 
TGTTTAATCA GGGAAAAGAG CCTTCCTGTT TTGCCTGAGG TAGAGCAGTT AGCTTGCCTG 
ACCGGCAGGA ACACCCTGGA TTGGATTATG GATGGCGGCG AGGATTATGA ACTTCTTTTT 
ACTCTTCGTC CAGAGCGGCA AGAATACATA GAGAATGCCC TTGGCAAGGA AGGAATTTTA 
TATAAAGCCA TTGGGATTAT AACCCACTCT TCGGAAGGGA TGGTCCTGGA AAAAGAAGAT 
GGCGCCAAAG AAACCATTCT GTTGCAGGGG TACAGTCATT TTTAA
 
Protein sequence
MVRLAKLGEF GLIDLLNKNM LYDPEKVIAG IGDDAAVLKP PGTKWQLLTT DMMMENIHFR 
LDWSQYYQVG YKALAVNISD VAAMGGYPSH AVVSVGIPEE TRVEDIEELY RGLKEMACRF 
KVNLVGGDTV KSPGPLVINI ALMGEVEEGR AVFRSGAKPG DLIYTTGFLG TSAAGLYILS 
HNGDYPVELK EKVIRSHLLP EPRVAAARIL SELEGVTALD DNSDGLAAEL REICRASSAG 
CLIREKSLPV LPEVEQLACL TGRNTLDWIM DGGEDYELLF TLRPERQEYI ENALGKEGIL 
YKAIGIITHS SEGMVLEKED GAKETILLQG YSHF