| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2885 |
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| Symbol | |
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| ID | 4956372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3132671 |
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| End bp | 3133693 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640182066 |
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| Product | metalloendopeptidase glycoprotease family |
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| Protein accession | YP_001114214 |
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| Protein GI | 134300718 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00437129 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTATTA CAATCTTAGG CATTGAAACG TCTTGTGATG AAACCTCCGC TGCGGTTTTA
GTGGATGGGG TTGATCTACG ATCCAATATT ATATCTTCCC AAATAGAAAT TCATAAAAAG
TTTGGTGGTG TAGTACCAGA GGTGGCTTCC AGAAAACATT TGGAGAATGT TCACCCTGTA
ATCATAGAAG CCCTGGACAA GGCCGGAGTG GCTCCCGTTG ATCTGGATGC AGTGGCCGTC
ACCTATGGAC CTGGTTTGGT AGGTGCGCTA CTGGTGGGGG TAGCAGCTGC CAAGGCCATG
GCCTATTCTC TAGATGTTCC CTTAATTGGT GTCAACCACT TGGAAGGACA TATTTCAGCA
AACTTTTTGG CCCAACCGGA TTTACAGTTT CCTTTACTTT GCTTAGTGGT TTCTGGTGGG
CATTCTGATT TAGTATACTT ACCCAGCCGT GGTGAATATA AATTATTGGG ACGAACCCGG
GATGATGCAG CGGGTGAAGC CTTTGACAAA GTAGCCCGTT CCATGGGTCT TGGCTACCCG
GGGGGGCCTT TAATTGATAA ATTGGCCAAA AATGGTAACC CCCAAGCCAT TCAGTTTCCC
AGGGCTTATT TGGAAGAAGG CAGCTTTGAT TTCAGTTTCA GTGGGTTAAA ATCCGCTGTA
TTAAACTATT TAAATAGAGC CAAGATGCTA AATGAGGAAA TCAACAAAGC TGACCTGGCT
GCCAGCTTCC AGAGGGCAGT GGTGGAGGTA TTGGTTGAAA AGACCATCAT GGCAACCCGA
AAAATCGGTG TTAAAACCAT CATGCTGGCG GGTGGTGTGG CAGCAAACCA GGGTCTTCGG
GAATTGCTTC AAGAGAGAGC CGCTTTAGCC GGCTGCCAGG TGTTTTTCCC GCCTATAAAT
CTTTGCACTG ATAATGCTGC CATGATTGCC TGTGCGGGCT ACTATAAATA TCTTAGGGGC
GATTTTGCAC CTTTAACATT AAATGCCCTT CCAAGCTTGC CCTTAGGGGA GGACCGCTAT
TAA
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| Protein sequence | MGITILGIET SCDETSAAVL VDGVDLRSNI ISSQIEIHKK FGGVVPEVAS RKHLENVHPV
IIEALDKAGV APVDLDAVAV TYGPGLVGAL LVGVAAAKAM AYSLDVPLIG VNHLEGHISA
NFLAQPDLQF PLLCLVVSGG HSDLVYLPSR GEYKLLGRTR DDAAGEAFDK VARSMGLGYP
GGPLIDKLAK NGNPQAIQFP RAYLEEGSFD FSFSGLKSAV LNYLNRAKML NEEINKADLA
ASFQRAVVEV LVEKTIMATR KIGVKTIMLA GGVAANQGLR ELLQERAALA GCQVFFPPIN
LCTDNAAMIA CAGYYKYLRG DFAPLTLNAL PSLPLGEDRY
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