| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2824 |
|---|
| Symbol | |
|---|
| ID | 4958424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3063960 |
|---|
| End bp | 3064733 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640182005 |
|---|
| Product | thiamine pyrophosphate binding domain-containing protein |
|---|
| Protein accession | YP_001114153 |
|---|
| Protein GI | 134300657 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.151463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTGT CTCCACAACC TGCCATGCCT AAAAGCTGGC GTGCAGAAAG CAAGCCCCAT
AAATTCTGTC CCGGTTGCGG CCACGGCCTG GTATTAAAAT GCCTGGGCGA AGCCATTGAT
GAACTGGGTA TTCAAGATAG AGTTGTATTC GGATGTGACA TTGGATGTTC TTTGCTGTCC
TGGGATTTCT TCAACTGTGA CAGTGTACAA ACCCACCATG GTCGTACTAC CCCGGTAATG
ACTGGTATCA AACGGGCAAA CCCCGATATG ATCTGTGTTG CATATATGGG TGATGGCGGC
GGTTATGCCA TTGGTATTGG CGGCATTGTT AACGCTGCTT CTCGTAATGA GAAAGTAACT
GTACTGCTGG CCAACAACAC CGTTTATGCC ATGACCGGTG GTCAGATGTC CCCCTGTACC
ATGCCCGGAC AAAAGGTTGA AACAGCTCCC TATGGACGTG ACCCCGAAGC AACCGGTATG
CCCACCCAGG GACCTGAAAT GATCTCTGCC ATCACTGGAG ACGGTGCCTA TGTTGCCCGC
GGTACCACTT CTAACTTAAA GCAATTAAAG AGTTATATTA AAAAAGCGCT GCAAAACCAA
ATAGATGGAA GGGGCTTCTC CTTCGTTGAA GCACTGGCTG GTTGTCCCAC CAACTGGCGG
ACCAATGCTG AGAAGACCTG GGCCTTTATT GAAAAAGAAA TGACTCAGTA CTACAAAGTA
GGGGAAAAGA AAAACCCTTT CGAGGCTAAA AAGGAGGCTC AGCAGAATGG CTAA
|
|---|
| Protein sequence | MSVSPQPAMP KSWRAESKPH KFCPGCGHGL VLKCLGEAID ELGIQDRVVF GCDIGCSLLS
WDFFNCDSVQ THHGRTTPVM TGIKRANPDM ICVAYMGDGG GYAIGIGGIV NAASRNEKVT
VLLANNTVYA MTGGQMSPCT MPGQKVETAP YGRDPEATGM PTQGPEMISA ITGDGAYVAR
GTTSNLKQLK SYIKKALQNQ IDGRGFSFVE ALAGCPTNWR TNAEKTWAFI EKEMTQYYKV
GEKKNPFEAK KEAQQNG
|
|---|
| |