Gene Dred_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2817 
Symbol 
ID4958237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3058146 
End bp3059537 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content46% 
IMG OID640181998 
Productnitrogenase molybdenum-iron protein beta chain 
Protein accessionYP_001114146 
Protein GI134300650 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01286] nitrogenase molybdenum-iron protein beta chain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGATT GCACACCGAA AGAAATTAGA AAACGTACTG GCGGCATGAT TAACCCGGCT 
AAAACTTGTC AGCCCATTGG AGCCATGTAT GCTGCGCTGG GCATCCACAG GTGCTTGCCC
CACAGCCACG GTTCCCAGGG ATGTTGCTCC TATCACCGTA TGCACCTGTC CCGGCATTTT
CGTGATCCCA TTATGGCTTC GACCAGTTCC TTTACCGAAG GTGCCTCTGT ATTTGGTGGC
GGTGCCAACT TAAAAACAGC CATAAAAAAC GTATTTGCCA TCTATAATCC AGATATTATG
GCAGTGCATA CGACCTGTCT ATCCGAAACC ATTGGGGATG ATTTGCCAAC CTTTATTCGG
ACATCGGAAG TCCCCGAGGG TAAACTGGTT ATTCATGCTA ATACACCCAG TTATCAAGGT
TCCCACGTAA CAGGCTTTTC CAATATGACG AAGGGTATGG TCAACTACCT ATCTGAAGCT
TCTCTGGAAA CAAAAAAAGA ACAGGCTAAT GTAATTCCAG GTTTTGTTAA CCCTGGGGAC
ATGAGAGAAA TTAAAAGAAT TGTCAAGACC ATGGGGATTC CGTTTATTAT GTTCCCAGAT
ACTACCGGGG TTGTGGATAC CCCGATGACC GGTAAATATG AAATGTTTCC CAAGGGTGGA
ACCACCGTAC CGGAACTCAT TGATACAGGG AATTCTAAAG TAACCCTAGC CTTGGGTAGC
TATGCTTCAT CCGATGCTGC CAACCAGTTG GATAGAAAAT GCCAGGTTCC TGCGGTAACC
CTGAAGACAC CCATTGGCAT CAAGGCCACT GACGAGTTTT TAATGGCATT AATGAACAAG
TTTACTGTAG ATGTTCCCTA TGAATTGGAA GAGGAGCGGG GACAGTTGGT GGACATCATG
ACCGATACCC ATTTCCACTT CCACGGCAAA AAAGTTGCCA TCTTTGGCGA TCCAGATATT
GTTATTGCCA TGACCGAATT TGTCTTAAGC TTGGGCATGA TACCCATCCA TGTATTAACG
GGTACTCCTG GTAGCGGGGG GGCCATTGGT ACTATGGTAG GAAACTTTGA GGATGAAGTG
AAGAGCATGT TAAAAGATGC TGGTGTAGAA GGAAGAGTAA AGGCAGCGGG TGACCTTTTT
GAATTGCACC AATGGATCAA GAATGAACCC GTTGATCTTT TGATTGGCAA TACCTATGGC
AAATATATTG CCAGGGCGGA AGATATTCCA CTGGTTCGTC TGGGCTTCCC CATTCTGGAC
AGAAGTGTAC ACTCTTACCT GCCGGTGGTA GGTTACAAAG GCGCCATGCG CTTGCTTGAA
ATGATCAGCA ATGCGTTGCT GGAGCGGCAA GACAGAGATG CCAAGGATGA AGATTTTGAG
TTGGTAATGT AA
 
Protein sequence
MLDCTPKEIR KRTGGMINPA KTCQPIGAMY AALGIHRCLP HSHGSQGCCS YHRMHLSRHF 
RDPIMASTSS FTEGASVFGG GANLKTAIKN VFAIYNPDIM AVHTTCLSET IGDDLPTFIR
TSEVPEGKLV IHANTPSYQG SHVTGFSNMT KGMVNYLSEA SLETKKEQAN VIPGFVNPGD
MREIKRIVKT MGIPFIMFPD TTGVVDTPMT GKYEMFPKGG TTVPELIDTG NSKVTLALGS
YASSDAANQL DRKCQVPAVT LKTPIGIKAT DEFLMALMNK FTVDVPYELE EERGQLVDIM
TDTHFHFHGK KVAIFGDPDI VIAMTEFVLS LGMIPIHVLT GTPGSGGAIG TMVGNFEDEV
KSMLKDAGVE GRVKAAGDLF ELHQWIKNEP VDLLIGNTYG KYIARAEDIP LVRLGFPILD
RSVHSYLPVV GYKGAMRLLE MISNALLERQ DRDAKDEDFE LVM