Gene Dred_2733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2733 
Symbol 
ID4957513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2960079 
End bp2960804 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content41% 
IMG OID640181913 
Productcobalt ABC transporter, inner membrane subunit CbiQ 
Protein accessionYP_001114062 
Protein GI134300566 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.436058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAT CTTTCTTTGC CATTGCCTCA ATGGTCATTT GTATGTTTGC CAATTCAATC 
ATTGTATCCA TTCTGGTAAT GGTTCTAATG GCAGGGGGCA CCATTTTTCT TGGTAAAGTG
CCCTTACGTT TTTATTTAAG GCTTCATTTA CTCCCTGTTA CATTCCTTTC CCTGGGAACC
TTAAGTGTTG CCGTAACAAC GATAACCTCA ACGGATGCCG TCATATGTTA CTGGAACTTA
CTGGGCTACC CGCTGGGCAT AACCTCTGAA AACCTGCATG CCTCCCTTGT TACCTTTAGT
AAATCCTTGG GAGCTGTTTC CTGTTTGTTC TTTTTAGTTC TTACAACTTC TATGCTAGAC
ATCATAGATC TGTTACGAAG GATAAGGACT CCGGAATTGT TTCTGGAACT GATGCTTTTA
GTCTATCGTT TTTTATTTGT ACTCTGGGAC AGCGGACAAA AAACTTACCA TGCCCAGTCC
GCAAGGTTAG GCTATTCCTC CGGCAAAAAA GGTTTAATCT CCATGGGTAT GTTGGTCAGT
GGCCTCCTTC TTCACTCTTT CCGACGCTCC AGGGAACTGG CCTTGTCCTT GGATGCAAGG
GGGTATAACG GCTCCTTAAA AGTTTTAGGC AAGGATTATA CTTATTCCAA AAGAAATATC
GCCATCATTT GCTTTATTGA ACTATTTATA ATATTAGTAG CATACAAAGG CAGGAGTATT
TTATAA
 
Protein sequence
MEKSFFAIAS MVICMFANSI IVSILVMVLM AGGTIFLGKV PLRFYLRLHL LPVTFLSLGT 
LSVAVTTITS TDAVICYWNL LGYPLGITSE NLHASLVTFS KSLGAVSCLF FLVLTTSMLD
IIDLLRRIRT PELFLELMLL VYRFLFVLWD SGQKTYHAQS ARLGYSSGKK GLISMGMLVS
GLLLHSFRRS RELALSLDAR GYNGSLKVLG KDYTYSKRNI AIICFIELFI ILVAYKGRSI
L