Gene Dred_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2728 
Symbol 
ID4957461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2955553 
End bp2956608 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content50% 
IMG OID640181908 
Productnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_001114057 
Protein GI134300561 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTAT TAGCTGAAAC TTTATCTAAG ATTCAAGCTC CGGACCAAAC CTGTGTAGAA 
CAGGCCAAAC AGAGGTTGGA CAGCCTGACC AAACCGCCGG GTAGCCTGGG AATATTAGAG 
GATATTGCCT GGCGGTTAGC TGGCATTCAG CGGGTACCAC TCCCACAACT ACCCCGGGAG 
AAGGTTTCTC TGGTTTTAGC CGGAGATCAC GGGGTAGTAG CCGAAGGAGT CAGTGCCTTT 
CCCCAGGAAG TAACTCCTCA AATGATATTC AATTTCCTGC AGGGTGGTGC CGGTATCAAT 
GTATTGGCCC GGCAGGCCGG AGCCAAGGTT GTGGTGGCTG ATATTGGGGT AGCCGGACCA 
CCTTTGGAAA AAACAGGTCT TGTTTCCTGC CGAGTAAAAT CTGGAACAGA TAATTTTGCT 
GTAGGCCCTG CCATGAGCAG GGAAGAGGCT GTTAAATCCA TTGAGGCTGG TATCTCCCTA 
CTACAGCAGC AGGTTAAAGA ACGTCCTGCC CTAGTTGCTA TTGGTGAGAT GGGCATTGGT 
AACACCACTC CCAGTGCCGC TATTTTAGCT GCTTTTACCG GAATGCCGGT AGAGGAAATT 
ACTGGTCGTG GCACAGGTAT TGATAACCAG CGTCTACAGC ATAAGATAGC TGTGATTAAG 
CGGGGGCTAG AGGTAAATCG TCCCGATGCC AATGATGGTC TGGATGTGTT GTCCAAAGTG 
GGTGGTTTAG AAATCGGTGG CATGGCGGGA ATTATTTTAG GTTGCGCCGC AGAGGGTATT 
CCCGTAGTGC TGGATGGGTT TATTTCCGGT GCGGCAGCCC TGGTGGCCCA ATCCCTGGCA 
CCACTTAGCC GTGAGTATAT GTTTGCCTCC CATGGTTCAG TAGAACCGGG TCATCGCATT 
ATGCTGGAAA AGTTAGGTTT AAAGCCTATG CTGCAGATGG AAATGAGACT GGGCGAAGGG 
ACCGGTGCAG CCTTGGCTTA TCCCATTATT GAGTCTGCGG TACGTATTAT TAACGAAATG 
GCTACCTTTG CGGAAGCGGG AGTTAGTAAA GGATAA
 
Protein sequence
MTLLAETLSK IQAPDQTCVE QAKQRLDSLT KPPGSLGILE DIAWRLAGIQ RVPLPQLPRE 
KVSLVLAGDH GVVAEGVSAF PQEVTPQMIF NFLQGGAGIN VLARQAGAKV VVADIGVAGP 
PLEKTGLVSC RVKSGTDNFA VGPAMSREEA VKSIEAGISL LQQQVKERPA LVAIGEMGIG 
NTTPSAAILA AFTGMPVEEI TGRGTGIDNQ RLQHKIAVIK RGLEVNRPDA NDGLDVLSKV 
GGLEIGGMAG IILGCAAEGI PVVLDGFISG AAALVAQSLA PLSREYMFAS HGSVEPGHRI 
MLEKLGLKPM LQMEMRLGEG TGAALAYPII ESAVRIINEM ATFAEAGVSK G